Detailed information of XP_065660733.1 in Hydra vulgaris

Genomic Location: NC_088928.1:9125351...9172874
NR annotation: XP_047132460.1, endoribonuclease Dicer-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6TV19Endoribonuclease Dicer OS=Danio rerio OX=7955 GN=dicer1 PE=2 SV=2
Q25BN1Endoribonuclease Dicer OS=Gallus gallus OX=9031 GN=DICER1 PE=2 SV=3
Q9UPY3Endoribonuclease Dicer OS=Homo sapiens OX=9606 GN=DICER1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00636Ribonuclease_3Ribonuclease III domainFamilyInterproscan
PF03368Dicer_dimerDicer dimerisation domainDomainInterproscan
PF20930Dicer_PBDDicer, partner-binding domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF02170PAZPAZ domainDomainInterproscan
PF20932Dicer_dsRBDDicer, dsRNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000999DomainRibonuclease III domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR005034DomainDicer dimerisation domainInterproscan
IPR036389Homologous_superfamilyRibonuclease III, endonuclease domain superfamilyInterproscan
IPR048513DomainDicer, partner-binding domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR038248Homologous_superfamilyDicer dimerisation domain superfamilyInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR003100DomainPAZ domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR044441DomainDicer, double-stranded RNA-binding domainInterproscan
IPR036085Homologous_superfamilyPAZ domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14950DICER-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004525Molecular Functionribonuclease III activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0016891Molecular FunctionRNA endonuclease activity, producing 5'-phosphomonoestersInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030422Biological ProcesssiRNA processingInterproscan
GO:0031054Biological Processpre-miRNA processingInterproscan
GO:0004530Molecular Functiondeoxyribonuclease I activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006309Biological Processapoptotic DNA fragmentationInterproscan
GO:0016442Cellular ComponentRISC complexInterproscan
GO:0090501Biological Processobsolete RNA phosphodiester bond hydrolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11592DICER1, DCR1; endoribonuclease DicerEC:3.1.26.-
Chromosome and associated proteinsko03036deepkoala

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