Detailed information of XP_065660887.1 in Hydra vulgaris

Genomic Location: NC_088928.1:15266891...15293604
NR annotation: XP_002165931.3, replication stress response regulator SDE2 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5BJN8UBL fusion protein SDE2 OS=Rattus norvegicus OX=10116 GN=Sde2 PE=1 SV=2
Q8K1J5Splicing regulator SDE2 OS=Mus musculus OX=10090 GN=Sde2 PE=1 SV=1
Q6IQ49Splicing regulator SDE2 OS=Homo sapiens OX=9606 GN=SDE2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13297SDE2_2CReplication stress response SDE2 C-terminalDomainInterproscan
PF13019Sde2_N_UbiSilencing defective 2 N-terminal ubiquitin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025086DomainSDE2-like, C-terminal domainInterproscan
IPR051421FamilyRNA Processing and DNA Damage Response RegulatorInterproscan
IPR024974DomainSde2, N-terminal ubiquitin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12786SPLICING FACTOR SF3A-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25059SDE2; replication stress response regulator SDE2-DNA repair and recombination proteinsko03400deepkoala

TOP