Gene detail

Detailed information of XP_065661043.1 in Hydra vulgaris

Genomic Location: NC_088928.1:19367121...19464293
NR annotation: XP_047132355.1, hapless 2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_065804971.1

tattattattttatagaaaatgatttttaaaatgaagattCAGCTTTTGTTATCTTTTTTCAATATCGCTATTAACATAACATTTGTTGGCTgcctaattttatcaaaaagttcAATTGAGTTCTGTGAAAATACAGGATTAAGCAATGATCTAAAGGATCCCACAAATGTAGTAACCCAATCAGCATGTGAAAAAAAGATGGTTGTTTTGTTGTCTGTTGGAAATAAGCAgggaGAAACTGAAAAGCTTCAGGCTGTTGTTTCTGTTGTTCAAAACTCAGCCACAAATGAATTTGCAAGACTATATAATCCATTTATGATAACTGTTTCAAAATCACCTGTTTATCTTAACTTCCCATTCTTTTTTAATGGAataacaGTAAATAATCAACCTTatgaagaaataattttgaGCAAAAATCATTGGTATGTTTCAGATAGTTCTCGTCAATGCTTAGACCAATGGCAAGtggatgaagatgatgatgaacATCCAACTTGTGGCTACCAATATATAAACAGCAATCAAACACAAACTGATGGAACATGGAAGACTGTCAAAACAAGAATTTGGGACAGCcagggATTTTGTTGCTATTGTACGCAAGatctaaaaaactattatatcaaaaaagataTTCAAGACTTAAACAGAGCTAATATTATTTGCAAACCTCTGACAAATTCCCCACAAGCATCTGCTCATTGCATGAGAATGAGCAATTTATGGTACACTTTAAATGAGTTTACTGAGTCCTACAGAGATTTTTCGATATACGTGAAAGCTTTTGACCAAATTACAAAAGTTGTACAAAATAAATCATACATAGATTATGTTAATGGTGGTGAGATAGTTTTATCTCCAAGTCAAAAAAGTGCGATCGGATCTTACAACAGGataacaGGGAATTATGTTGGTGATCTTCAACCTATTAAAAGCTATCCTGTATTaacaaataactattttttaattccaTTCAGTTCTACGAATATTGATCCTAAAAAAGAACCTCAGCTAAagAGTGGGATTTCAAAGTGGATGATAATACCTCGTGATTTAGTTAGTACAGATGCAAAGCAATGCGATATGATTGGTGTAGGTTATTCAGCATTCAGAAATCAAGCTGCTTATGGAACTGGTTATGGATGCAGAGCCAAAAAAGGATCATGTTTAGCTAATCAAccttataacaaatttatggATGAtgagGTTTCAATCCCATCATGCACGTCTGGCGTTCAGCCAATAGAAGAAAAGCGTATCACTATTGATCCTCAGATGACAGAGACTATTACATTCAAAATGATGACTTCCACAGATAAAAAAGCAGCACATGATTGCACAAttaatttatatGATTCAAAAAACATGTTGCTTCAAAGTCgcaattttacattttctacaAAAGCACCATGTGTTTGTGAAGTACAATCTTGCAAATGTGATtgcTCCGAAGGTGGTGGCGTAAAATGTGTGCAAGCTGAAGGAAAGTTTATAGATAATCCAAACCTCTTTGTACCACAATCCACAGGTTTTTTTGACAAGCTGTGGAGTAGTATAAAGTCCTTTCCCTCTATTATAGGTAACTTTTTTAGTGGAATATTTGGCTCTTTATTCGGAAATCTGGTTCAGTATGCAATTTTTGCAGCAATAGCACTGGTTGTAATATGTTTGTGTTGCAATTGTGGCGGTTTTAGATTGCTCAAAAGATTCATTcctaaattcaataaaaaaggatataaacATCTTAAACTAAAAAGATACCAAGAACAAATATATAAGCCAAAAGAGATTACTAATGGAATTCCAACTACAGCCATGCAAAGTATTACACACGTACCTAATATGCCTATACCGTCAAATACTTAATGCGCTTACTCCATCATATGTAAATACAAACGTATTATCcgataaaagttaaaaattattaaccttaAAGCTCTCTAAAAACGAGGTTTAATACCTTCTAACAAGAATTATTCATCAAATGTTACCTTACAGTTATAAATGAGGTCAATAACTAGtgtcttaaaatttaaaaagtgtcatctaaatgtataaatattttaattagtttttacgTTTTATCATGGAAAGGAGTGTTGTAACttg

Protein

Uniprot

Uniprot term	Description
A7SIM4	Hapless 2 OS=Nematostella vectensis OX=45351 GN=HAP2 PE=1 SV=1
Q5W6B9	Protein HAPLESS 2-A OS=Oryza sativa subsp. japonica OX=39947 GN=HAP2A PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10699	HAP2-GCS1	Male gamete fusion factor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040326	Family	HAP2/GCS1	Interproscan
IPR018928	Domain	Generative cell specific-1/HAP2 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31764	PROTEIN HAPLESS 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03440	ASICN; acid-sensing ion channel, other	-	Ion channels	ko04040	deepkoala