Gene detail

Detailed information of XP_065661212.1 in Hydra vulgaris

Genomic Location: NC_088928.1:25147448...25150230
NR annotation: NP_001296713.1, paired box protein Pax-3-like [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P54366	Homeobox protein goosecoid OS=Drosophila melanogaster OX=7227 GN=Gsc PE=2 SV=2
P53544	Homeobox protein goosecoid OS=Danio rerio OX=7955 GN=gsc PE=2 SV=1
P29454	Homeobox protein goosecoid isoform A OS=Xenopus laevis OX=8355 GN=gsc-a PE=2 SV=2

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR051440	Family	Goosecoid-like homeobox	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46643	HOMEOBOX PROTEIN GOOSECOID-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09325	GSCL; homeobox protein goosecoid-like	-	Transcription factors	ko03000	deepkoala