Genomic Location: NC_088928.1:8586287...8603144
NR annotation: XP_050551752.1, transposable element Tcb2 transposase [Spodoptera frugiperda]
| CDS | ||||
| LOC136085244 | ||||
| Transcript |
| rna-XM_065806533.1 |
| Protein |
| XP_065662605.1 |
| Uniprot term | Description |
|---|---|
| P34257 | Transposable element Tc3 transposase OS=Caenorhabditis elegans OX=6239 GN=tc3a PE=1 SV=1 |
| Q95SX7 | Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01498 | HTH_Tnp_Tc3_2 | Transposase | Family | Interproscan |
| PF13358 | DDE_3 | DDE superfamily endonuclease | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR052338 | Family | Transposase_5 | Interproscan |
| IPR002492 | Domain | Transposase, Tc1-like | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR038717 | Domain | Tc1-like transposase, DDE domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23022 | TRANSPOSABLE ELEMENT-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006313 | Biological Process | DNA transposition | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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