Genomic Location: NC_088929.1:31917794...31954167
NR annotation: XP_047142483.1, tetratricopeptide repeat protein 28 isoform X2 [Hydra vulgaris]
| CDS | |||||
| LOC100198550 | |||||
| Transcript |
| rna-XM_065807798.1 |
| Protein |
| XP_065663870.1 |
| Uniprot term | Description |
|---|---|
| Q96AY4 | Tetratricopeptide repeat protein 28 OS=Homo sapiens OX=9606 GN=TTC28 PE=1 SV=4 |
| Q80XJ3 | Tetratricopeptide repeat protein 28 OS=Mus musculus OX=10090 GN=Ttc28 PE=1 SV=3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13424 | TPR_12 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13181 | TPR_8 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF12770 | CHAT | CHAT domain | Domain | Interproscan |
| PF13374 | TPR_10 | Tetratricopeptide repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR024983 | Domain | CHAT domain | Interproscan |
| IPR052699 | Family | Regulatory & Mitotic Spindle Associated | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10098 | RAPSYN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K24936 | TTC28; tetratricopeptide repeat protein 28 | - | Cilium and associated proteins | ko03037 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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