Gene detail

Detailed information of XP_065664023.1 in Hydra vulgaris

Genomic Location: NC_088929.1:38414498...38418390
NR annotation: XP_002155361.3, elongator complex protein 3 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9VQZ6	Elongator complex protein 3 OS=Drosophila melanogaster OX=7227 GN=Elp3 PE=1 SV=1
Q5ZHS1	Elongator complex protein 3 OS=Gallus gallus OX=9031 GN=ELP3 PE=2 SV=1
Q5RIC0	Elongator complex protein 3 OS=Danio rerio OX=7955 GN=elp3 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16199	Radical_SAM_C	Radical_SAM C-terminal domain	Family	Interproscan
PF00583	Acetyltransf_1	Acetyltransferase (GNAT) family	Family	Interproscan
PF04055	Radical_SAM	Radical SAM superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032432	Domain	Radical SAM, C-terminal extension	Interproscan
IPR034687	Family	Elongator complex protein 3-like	Interproscan
IPR039661	Family	ELP3/YhcC	Interproscan
IPR000182	Domain	GNAT domain	Interproscan
IPR007197	Domain	Radical SAM	Interproscan
IPR016181	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR006638	Domain	Elp3/MiaA/NifB-like, radical SAM core domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11135	HISTONE ACETYLTRANSFERASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002926	Biological Process	tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0033588	Cellular Component	elongator holoenzyme complex	Interproscan
GO:0016747	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07739	ELP3, KAT9; elongator complex protein 3 (tRNA carboxymethyluridine synthase)	EC:2.3.1.311	Transfer RNA biogenesis	ko03016	deepkoala