Gene detail

Detailed information of XP_065664982.1 in Hydra vulgaris

Genomic Location: NC_088930.1:43011898...43022153
NR annotation: XP_012557981.2, rac-like GTP-binding protein ARAC5 isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_065808910.1

TAACAAACAACATGTAAAACAAGTGATATACGAACAgtattttagttgttaattaGTCGAGTTTAATGGATGTTGGATATTTCAGCGCTAATACGCTTTCGTATCACCTCTACTTTTTTTGTCACtctaacattttgaaatttgtaaattCAAAGGTGGTGCAAAGGTGTATTAGGGCTTATATTTAGGCCGAGACAGTCTCTGCCCAGTGATGACCACACAGCAGTATCAATTCTAATAAGATTTGCAGTACCAAAAATCTTTGCATCTGTAGCCCATACCTAACATAgataacaattattttcaaagttttaaatttcaacgACAAAAAAGATAATTCTACATCGTTAAAAAAAGCTTTGCAAAACAGGTATGTTCATCAATTAAGACTTCGCCATGGAAACGaatgaaaagcaaaaaatactCTGAGATGTAGTGGTTAAATTGAGAAAtttatctCCCAAAGttcgagaaggccactacactCAAGGAGACTactttaattgtggttataactctCTCTCAAGTCTATTATttcgaaacacgaaccttgacaaataaGTTCACTGTGgtgagaaacaagttaagcgcggTGATACAAGAGacgtggtgggaatcgaactccAAACttctcgtttatgaagcgagcgttCTACCACAACACCAATATAGGACGTCTATgagatataatttttgttcaaatacGTCTAACAAACAACTTCATACGATGTATCGTGAGCGAACTTCTTAAAGCGCTGTTCAAATAGgtgatatattaaaaatcttcaaGCCTTATTGTATTTTTAGATTTCAAGATTTTGTTCTGGTTGCGATGTTTTAaccaattataataatatagttgCTTAATTGTTTTGTAAGTAAATTGTTTGAATGTTTATTAGTTTAGATTAAATTAAATGAGTCGATAAAACTGTTGAAATTTATGTAACAAAACTTTGGTCAGCTccataattctttttttttttttattggactCGTTAAAAGTTACTTCATTATCAAACCGTggcgacaaaaaaaaatttaccgaaaaaaagaaagtataagTAAAAAGTGTTGTTAGCAATTTCggttttctataaaataaaataaaaagtttccatTACATATacgtttttaacgttttttaaatgtgcaaacaattattaaaacaaaaagtttgaaatacgacaataaaaagaaaagaagcgAAATTAATATCcgctaaaatagttttttacgtATTTACTACGTcgtttcaattatttatttacaccgTTAAGAAGAAATATTCGACCTACTTAAGTGTTAATTAACCTAACACCTTCATTGAAGTgaatttatttttcagtttatcTATATAAGTATCacattattcatattttatagttttacatCGCTGTGCTATATTTTTGTCTCAAAGAAAACGAagctttcttttttatgtattggTAATCATTTTCACTTATTAAATGTTCATGGAAAATAAAACTAACGCGTTTGTAAGTAATTCAAGAGCATTTTTGGCTCGTacgttaacattaaaaaagatgaCTTCAAGGAAAAGCTGTAAGGCAATACTCCTTGGAGACTCAAATTGTGGGAAAACAAGTTTATGGAAAAAACACACAGAAACAGGCACTAACTATaaccaCATTCCTACTGTCTTTGAGTTTTCGGaaacaataatatttcttgATAAAAACTCGGAGGTAAAACTTACAATATGGGATACACCAGgTTCGTCAGAATTTGATCACGTTCGCTTATTATCTTTTGATGGCGTTGATGTTTTTGTActatgttttgatttaaatctACCAGAATCACTAGAAAATGTCCAAACAAAGtgGGCAAAAGAGGCCAAAGCATTTTCTCCCAGTACACCCATAGTTCTTTGCGGTTGCAAATGTGATTTGCAAGATGTCAACAAATGTGATAAAGATATGattgaTAAAGTGATACAGCAAATTGACTCATCTGCGTATATTGAGTGCTCAAGTCAGAATAACACGAACGTCGAAGAGATTTTCAAGACAATTTCTTTTCTCGCCATTGGCGAagccaataaaataaaaagtgagtttaaatgcaaaactaaaaaaaaaaacgtcaacAGATGTTGCGTTACCTAACGTTAATTAGCATTAACTTTACGTTATTCAGTGTACCTACATATCAAACCTACATGAATTTTCCAAAagtgaaaactttttatttttgtattttattttttatatcttttatattttatatacttagtATTGTGAAATAGATAAAATATGTCATATCGCATAATAGAATACATATACTTTTTTCGTAATTTATACTGAAATctgttaataaaagatttatagctTTAGCCAGATTTGTAAA

Protein

Uniprot

Uniprot term	Description
P06780	GTP-binding protein RHO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RHO1 PE=1 SV=3
Q8J212	GTP-binding protein Rho1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=RHO1 PE=3 SV=1
Q9HE04	GTP-binding protein rho5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rho5 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001806	Family	Small GTPase	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003578	Family	Small GTPase Rho	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24072	RHO FAMILY GTPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0019901	Molecular Function	protein kinase binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07859	RND3; Rho family GTPase 3	-	GTP-binding proteins	ko04031	deepkoala