Gene detail

Detailed information of XP_065666377.1 in Hydra vulgaris

Genomic Location: NC_088930.1:17073318...17124347
NR annotation: XP_047136345.1, uncharacterized protein LOC100211223 isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A0AUS0	WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio OX=7955 GN=wdsub1 PE=2 SV=1
Q5FVN8	WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdsub1 PE=2 SV=1
Q9D0I6	WD repeat, SAM and U-box domain-containing protein 1 OS=Mus musculus OX=10090 GN=Wdsub1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04564	U-box	U-box domain	Domain	Interproscan
PF00536	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF00786	PBD	P21-Rho-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003613	Domain	U-box domain	Interproscan
IPR052085	Family	WD repeat, SAM and U-box domain-containing	Interproscan
IPR000095	Domain	CRIB domain	Interproscan
IPR001660	Domain	Sterile alpha motif domain	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR036936	Homologous_superfamily	CRIB domain superfamily	Interproscan
IPR013761	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR011026	Homologous_superfamily	Actin nucleation-promoting factor WAS, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46573	WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007015	Biological Process	actin filament organization	Interproscan