Genomic Location: NC_088930.1:17158997...17231213
NR annotation: XP_047136348.1, WD repeat, SAM and U-box domain-containing protein 1 [Hydra vulgaris]
| CDS | |||||
| LOC100202909 | |||||
| Transcript |
| rna-XM_065810308.1 |
| Protein |
| XP_065666380.1 |
| Uniprot term | Description |
|---|---|
| Q5ZMC3 | WD repeat, SAM and U-box domain-containing protein 1 OS=Gallus gallus OX=9031 GN=WDSUB1 PE=2 SV=2 |
| Q5FVN8 | WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdsub1 PE=2 SV=1 |
| Q9D0I6 | WD repeat, SAM and U-box domain-containing protein 1 OS=Mus musculus OX=10090 GN=Wdsub1 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04564 | U-box | U-box domain | Domain | Interproscan |
| PF00536 | SAM_1 | SAM domain (Sterile alpha motif) | Domain | Interproscan |
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR003613 | Domain | U-box domain | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR052085 | Family | WD repeat, SAM and U-box domain-containing | Interproscan |
| IPR013761 | Homologous_superfamily | Sterile alpha motif/pointed domain superfamily | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR001660 | Domain | Sterile alpha motif domain | Interproscan |
| IPR020472 | Repeat | G-protein beta WD-40 repeat | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46573 | WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K24764 | WDSUB1; WD repeat, SAM and U-box domain-containing protein 1 | - | Domain-containing proteins not elsewhere classified | ko04990 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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