Genomic Location: NC_088931.1:7642166...7732354
NR annotation: XP_047126960.1, transcription initiation factor TFIID subunit 1 [Hydra vulgaris]
| CDS | |||||
| LOC100212966 | |||||
| Transcript |
| rna-XM_065811410.1 |
| Protein |
| XP_065667482.1 |
| Uniprot term | Description |
|---|---|
| Q60544 | Transcription initiation factor TFIID subunit 1 OS=Mesocricetus auratus OX=10036 GN=TAF1 PE=2 SV=1 |
| P21675 | Transcription initiation factor TFIID subunit 1 OS=Homo sapiens OX=9606 GN=TAF1 PE=1 SV=3 |
| Q80UV9 | Transcription initiation factor TFIID subunit 1 OS=Mus musculus OX=10090 GN=Taf1 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00439 | Bromodomain | Bromodomain | Domain | Interproscan |
| PF15288 | zf-CCHC_6 | Zinc knuckle | Domain | Interproscan |
| PF09247 | TBP-binding | TATA box-binding protein binding | Domain | Interproscan |
| PF12157 | DUF3591 | Protein of unknown function (DUF3591) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036427 | Homologous_superfamily | Bromodomain-like superfamily | Interproscan |
| IPR001487 | Domain | Bromodomain | Interproscan |
| IPR041670 | Domain | Zinc knuckle | Interproscan |
| IPR009067 | Domain | TAFII-230 TBP-binding | Interproscan |
| IPR018359 | Conserved_site | Bromodomain, conserved site | Interproscan |
| IPR036741 | Homologous_superfamily | TAFII-230 TBP-binding domain superfamily | Interproscan |
| IPR040240 | Family | Transcription initiation factor TFIID subunit 1 | Interproscan |
| IPR022591 | Domain | Transcription initiation factor TFIID subunit 1, histone acetyltransferase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13900 | TRANSCRIPTION INITIATION FACTOR TFIID | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0004402 | Molecular Function | histone acetyltransferase activity | Interproscan |
| GO:0005669 | Cellular Component | transcription factor TFIID complex | Interproscan |
| GO:0006366 | Biological Process | transcription by RNA polymerase II | Interproscan |
| GO:0016251 | Molecular Function | RNA polymerase II general transcription initiation factor activity | Interproscan |
| GO:0017025 | Molecular Function | TBP-class protein binding | Interproscan |
| GO:0051123 | Biological Process | RNA polymerase II preinitiation complex assembly | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K03125 | TAF1; transcription initiation factor TFIID subunit 1 | EC:2.3.1.48 EC:2.7.11.1 | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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