Detailed information of XP_065668226.1 in Hydra vulgaris

Genomic Location: NC_088931.1:86918167...86922509
NR annotation: NBW86349.1, hypothetical protein [Planctomycetia bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P42486DNA-directed RNA polymerase RPB1 homolog OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) OX=10498 GN=Ba71V-99 PE=1 SV=1
P0C988DNA-directed RNA polymerase RPB1 homolog OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) OX=561444 GN=War-109 PE=3 SV=1
P0C989DNA-directed RNA polymerase RPB1 homolog OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) OX=561445 GN=Ken-111 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04983RNA_pol_Rpb1_3RNA polymerase Rpb1, domain 3DomainInterproscan
PF00623RNA_pol_Rpb1_2RNA polymerase Rpb1, domain 2DomainInterproscan
PF04997RNA_pol_Rpb1_1RNA polymerase Rpb1, domain 1DomainInterproscan
PF04992RNA_pol_Rpb1_6RNA polymerase Rpb1, domain 6DomainInterproscan
PF04998RNA_pol_Rpb1_5RNA polymerase Rpb1, domain 5DomainInterproscan
PF05000RNA_pol_Rpb1_4RNA polymerase Rpb1, domain 4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007066DomainRNA polymerase Rpb1, domain 3Interproscan
IPR044893Homologous_superfamilyRNA polymerase Rpb1, clamp domain superfamilyInterproscan
IPR006592DomainRNA polymerase, N-terminalInterproscan
IPR042102Homologous_superfamilyRNA polymerase Rpb1, domain 3 superfamilyInterproscan
IPR038120Homologous_superfamilyRNA polymerase Rpb1, funnel domain superfamilyInterproscan
IPR045867FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan
IPR000722DomainRNA polymerase, alpha subunitInterproscan
IPR007080DomainRNA polymerase Rpb1, domain 1Interproscan
IPR007075DomainRNA polymerase Rpb1, domain 6Interproscan
IPR007081DomainRNA polymerase Rpb1, domain 5Interproscan
IPR007083DomainRNA polymerase Rpb1, domain 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19376DNA-DIRECTED RNA POLYMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0001055Molecular FunctionRNA polymerase II activityInterproscan
GO:0005665Cellular ComponentRNA polymerase II, core complexInterproscan

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