Detailed information of XP_065669589.1 in Hydra vulgaris

Genomic Location: NC_088931.1:47725171...47959590
NR annotation: XP_047125795.1, vacuolar protein sorting-associated protein 13A [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q709C8Intermembrane lipid transfer protein VPS13C OS=Homo sapiens OX=9606 GN=VPS13C PE=1 SV=1
Q8BX70Intermembrane lipid transfer protein VPS13C OS=Mus musculus OX=10090 GN=Vps13c PE=1 SV=2
Q96RL7Intermembrane lipid transfer protein VPS13A OS=Homo sapiens OX=9606 GN=VPS13A PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16908VPS13_ext_choreinVacuolar sorting-associated protein 13, extended-choreinRepeatInterproscan
PF16910VPS13_mid_rptVPS13, central RBG modulesRepeatInterproscan
PF16909VPS13_DH-likeVacuolar-sorting-associated 13 protein, DH-like domainFamilyInterproscan
PF12624Chorein_NVPS13-like, N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031646DomainVacuolar protein sorting-associated protein 13, extended choreinInterproscan
IPR031642DomainVPS13, middle RBG modulesInterproscan
IPR031645DomainVacuolar protein sorting-associated protein 13, DH-like domainInterproscan
IPR026847FamilyVacuolar protein sorting-associated protein 13Interproscan
IPR026854DomainVacuolar protein sorting-associated protein 13-like, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0019898Cellular Componentextrinsic component of membraneInterproscan
GO:0045053Biological Processprotein retention in Golgi apparatusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19525VPS13A_C; vacuolar protein sorting-associated protein 13A/C-Membrane traffickingko04131deepkoala

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