Genomic Location: NC_088931.1:48102937...48119641
NR annotation: XP_012560295.1, stromelysin-3 [Hydra vulgaris]
| CDS | |||||
| LOC101239608 | |||||
| Transcript |
| rna-XM_065813523.1 |
| Protein |
| XP_065669595.1 |
| Uniprot term | Description |
|---|---|
| O18927 | Collagenase 3 OS=Equus caballus OX=9796 GN=MMP13 PE=2 SV=1 |
| O62806 | Collagenase 3 OS=Oryctolagus cuniculus OX=9986 GN=MMP13 PE=2 SV=1 |
| P45452 | Collagenase 3 OS=Homo sapiens OX=9606 GN=MMP13 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00413 | Peptidase_M10 | Matrixin | Domain | Interproscan |
| PF01471 | PG_binding_1 | Putative peptidoglycan binding domain | Domain | Interproscan |
| PF00045 | Hemopexin | Hemopexin | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR021190 | Family | Peptidase M10A | Interproscan |
| IPR001818 | Domain | Peptidase M10, metallopeptidase | Interproscan |
| IPR018487 | Repeat | Hemopexin-like repeats | Interproscan |
| IPR036375 | Homologous_superfamily | Hemopexin-like domain superfamily | Interproscan |
| IPR024079 | Homologous_superfamily | Metallopeptidase, catalytic domain superfamily | Interproscan |
| IPR000585 | Domain | Hemopexin-like domain | Interproscan |
| IPR033739 | Domain | Peptidase M10A, catalytic domain | Interproscan |
| IPR002477 | Domain | Peptidoglycan binding-like | Interproscan |
| IPR006026 | Domain | Peptidase, metallopeptidase | Interproscan |
| IPR036365 | Homologous_superfamily | PGBD-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10201 | MATRIX METALLOPROTEINASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004222 | Molecular Function | metalloendopeptidase activity | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| GO:0008237 | Molecular Function | metallopeptidase activity | Interproscan |
| GO:0030198 | Biological Process | extracellular matrix organization | Interproscan |
| GO:0030574 | Biological Process | collagen catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K01388 | MMP1; matrix metalloproteinase-1 (interstitial collagenase) | EC:3.4.24.7 | Peptidases and inhibitors | ko01002 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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