Genomic Location: NC_088932.1:42912950...42924442
NR annotation: XP_047140600.1, elongation factor-like GTPase 1 isoform X2 [Hydra vulgaris]
| CDS | |||||
| LOC100206687 | |||||
| Transcript |
| rna-XM_065816569.1 |
| Protein |
| XP_065672641.1 |
| Uniprot term | Description |
|---|---|
| Q7Z2Z2 | Elongation factor-like GTPase 1 OS=Homo sapiens OX=9606 GN=EFL1 PE=1 SV=2 |
| Q8C0D5 | Elongation factor-like GTPase 1 OS=Mus musculus OX=10090 GN=Efl1 PE=1 SV=1 |
| O74945 | Ribosome assembly protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ria1 PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00679 | EFG_C | Elongation factor G C-terminus | Domain | Interproscan |
| PF14492 | EFG_III | Elongation Factor G, domain III | Domain | Interproscan |
| PF00009 | GTP_EFTU | Elongation factor Tu GTP binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR035647 | Homologous_superfamily | EF-G domain III/V-like | Interproscan |
| IPR014721 | Homologous_superfamily | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup | Interproscan |
| IPR000795 | Domain | Translational (tr)-type GTP-binding domain | Interproscan |
| IPR000640 | Domain | Elongation factor EFG, domain V-like | Interproscan |
| IPR041095 | Domain | Elongation Factor G, domain II | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR009000 | Homologous_superfamily | Translation protein, beta-barrel domain superfamily | Interproscan |
| IPR020568 | Homologous_superfamily | Ribosomal protein uS5 domain 2-type superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR42908 | TRANSLATION ELONGATION FACTOR-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003924 | Molecular Function | GTPase activity | Interproscan |
| GO:0005525 | Molecular Function | GTP binding | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0042256 | Biological Process | cytosolic ribosome assembly | Interproscan |
| GO:0043022 | Molecular Function | ribosome binding | Interproscan |
| GO:1990904 | Cellular Component | ribonucleoprotein complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14536 | RIA1; ribosome assembly protein 1 | EC:3.6.5.- | Ribosome biogenesis | ko03009 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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