Genomic Location: NC_088932.1:33691338...33776873
NR annotation: XP_047139337.1, tetratricopeptide repeat protein 37-like isoform X2 [Hydra vulgaris]
| CDS | |||||
| LOC100203888 | |||||
| Transcript |
| rna-XM_065816935.1 |
| Protein |
| XP_065673007.1 |
| Uniprot term | Description |
|---|---|
| O94474 | Superkiller protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ski3 PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07719 | TPR_2 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13432 | TPR_16 | Tetratricopeptide repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR013105 | Repeat | Tetratricopeptide repeat 2 | Interproscan |
| IPR039226 | Family | Ski3/TTC37 | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15704 | SUPERKILLER 3 PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006401 | Biological Process | RNA catabolic process | Interproscan |
| GO:0034427 | Biological Process | obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | Interproscan |
| GO:0055087 | Cellular Component | Ski complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12600 | SKI3, TTC37; superkiller protein 3 | - | Messenger RNA biogenesis | ko03019 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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