Gene detail

Detailed information of XP_065676655.1 in Hydra vulgaris

Genomic Location: NC_088934.1:17394861...17441172
NR annotation: XP_047126804.1, IQ domain-containing protein E isoform X3 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

LOC136072128

ATGGAGAGCTCTGCAATGAACTCATTAAAGCTAAATAAAGGTGGTTCCCAATCCTCTGCAAGTTTATATCTTAAAGAAGCAATGGGAATGAAAACTGGAAAACAAAACAGGCCTCTTAGTGCAACGAGTCGAGTTGGAGGTACTGGTCCTGTTTACAAAGATGCTGAAACATATTATGATGAGATACAAATACTAAAAAATACAATGAAACAATTAAAAAACGAAAACGATATAATGAAAGCTAAGAACCTTCGTTTAGAAGAAGAAAATATTGCCAAGTCAAAGAAAATTGATGAACTTCTTAATCCAGATACACAGAGTAATGATTTAAGAAGAACTTTGACATCCAAAAAGCCAAGTTCTAGTGAGGTGGTAATGAGTTTACGACGAAAAATTTATAAACTGGAGGAAATTTTAAGAAATAAAGAAAATGAAACAAGAAAAATCGTTACTGATATGAAGTACACAAACTCTGAAGAGCTTCGAATTGAAAATCAAGTTTATCTTTCTGAGATAAATCGTTTAAATGCAGTTTTACATGATACTCAAAACCAGAGATCATCACTATCTGATCAAATGGTTAATGATGCTTTAAAATATTCAAATGGAACAAAAACAGAAATTGTTATCAAGAAGTTAACAGAGGAGAATCAAAGTCTTGTACTACAAAATAAATCATTGAAAAGTGATATCTTGAAGCAATCAAGCAATAATTTGCAGGTTGATTTAAATAAAGACTGTGAGGACATGAGTAGAAATGAACTTCTACAAAAAATAGCTATGTTAGAACAAAAAGTAAAACAAAGTGAAAAATTGGATGGAAGTTGTATAGATCATCCTAACAAAGATAAATCTGGTGAAGATTTGCATGAAAAAAGCATTGAACTTAGAGGTTCTTTGCCTCAACAAATAAAACAACTTCGTTCACGAGAAAAAGAGCTACTTGAACAGATAGACTGCTTAGAAAGTTCAGTTGCTAAATTAAAAGAAGATCGAACACATTATAGAAAAATGACAGATGATTTAAGACAACAAATTGAGGCAAATAAAAAAACACCTGTTACTTTGCAATCAAGAACAAGTACAGTAGAAAATGAAACAAAAATATCTAACGACATTAGAAAAAAGTCACTCATGCAAAAATCTTTGCCTGAAAATCTTAAGGAAGCTAAGTTTACGAATGAGAGAGCTGAGTTGGTAAAGGAAGAGAGACTGAATGCCTTAAAAGAAAATGAAGCAGCAACAACAATACAAAGAAGTTGGAGAAACCGAAAGAACAAAATGGAAAAAGCTCAAAACAATTATGAAGAAATATTAATCAATAGTGTCATTGAAATTCAAGCTGCATTAAAAGGTCATCTTGCTCGGCAGAAATTTATTGATTCCATTAATGAAGACAAAAATAAGAGTGGAGTTTTAAAAAATCTTTTAAAGAAGGAACCATATGAAAGTGATGTATTGCTTATTCAGTCCGCTTTTAGAGCTCACGCAGTTCGGAGTCAGTTTCTGAATAAAAACAAAAATGATGAAGAAAAACAAGTAAATAAGGTGGAAAATCATGCTAAAAAAAATAAAAAAGGTATGTACCATTCTTCTGCTGACAAAGAGAACAATGTTAAATCAAATGACGAATTGAGTAATATTGATTCTGATGAAGATGATGATGTGGTGGTAGGGAGCAGTGTGAGTCTCTCAAAATATAGAAACAACCAAAAATCTTCTTATAATATTAATGATTCTAAAACTCAGCCTGAAAAAGAATCTAAAGAAAATAATGAAAAATCATATAAGAATAATGGAAGATCAAATTTAAAATCTTCTTTTGATACCGATCACAAAAACCAACAGAAACATAAAGATTCTCATGATAAGCCAAGGTCCAAAGGATCTTTAGAATTATTTGTTGATAGTGACAGCTTGCATGATAAAAAAAGCCGTAAAATGACTCAAGCAACTTCTGTTACGCAATTAAAAGCATCATCGAACCCTTGGTCAAATAACTCAAAATTGATCAGTAATGAATATGACGATGATGAAGATGATGACGAAAATGATGAGTTAGTATGCACCTCAACATTAGGTAGAAAGCAAGATAAGTTAAAGAAGGAAACAGCTTCAAAAAAAGATAAAGATGAACTTGCAATGAAATGGGCAAGCAGTGGTTTGCAAAGTAAAAAATCTAAGGACGCAATTTTAGACAATAAACATTCTCAACTTCAGACCTCCATAAAAAATGCTACTGATGACAATATCAAACCGCATCAAGTTCAGAGAAAATTAGTTAAAAGCAAATTTGCACTTGATGACGAGCTTTTTTAA

Transcript

rna-XM_065820583.1

aaagctagttttttattgaaaatttagaaagttttaaattagtaaattataattttttaaaataacgcaCCTTAAAAGGCTTTTACCTTCAGAAAGAGATCATCAAACTGAAGTATTGTTAAAAAGTGACAACTGATTGTAGCTTAAGTAAAAGTGatcaacttaaaaaaGACTCAGATCAAATCTCGCTTGCCTCAGTTATTTCATTaAGAAGTATTCCAGATGATTTTGTTTTGGAATCTAACAGAAGTTTAGTCAAAGAAAAAGTTcccaaaatactcaaaaaaggtTTACCCTATGGATCATCttctaaatctaaaaaagtaCCAAAAAAGACTGGAAGAGAAGTTTGGGTGAATGCAATTCAAAATGGAACAggaTTAAGTATGGAGAGCTCTGCAATGAACtcattaaagctaaataaagGTGGTTCCCAATCCTCTGCAAGTTTATATCTTAAAGAAGCAATGGGAATGaAAACTGGAAAACAAAACAGGCCTCTTAGTGcaaCGAGTCGAGTTGGAGGTACTGGTCCTGTTTACAAAGATGCTGAAACATATTATGATGAGatacaaatactaaaaaatacaatgaaacaattaaaaaacgaaaacgATATAATGAAAGCTAAGAACCTTCGTTTAGAAGAAGAAAATATTGCCAAGTCAAAGAAAATTGATGAACTTCTTAATCCAGATACACAGAGTAATGATTTAAGAAGAACTTTGACATCCAAAAAGCCAAGTTCTAGTGAGGTGGTAATGAGTTTACGacgaaaaatttataaactggaggaaattttaagaaataaagaaaatgaaacaagaaaaatcgTTACTGATATGAAGTACACAAACTCTGAAGAGCTTCGAATTGAAAATCAAGTTTATCTTTCTGAGataAATCGTTTAAATGCAGTTTTACATGATACTCAAAACCAGAGATCATCACTATCTGATCAAATGGTTAATGatgctttaaaatattcaaatggaACAAAAACAGAAATTGTTATCAAGAAGTTAACAgAGGAGAATCAAAGTCTTGTACTACAAAATAAATCATTGAAAAGTGATATCTTGAAGCAATCAAGCAATAATTTGCaggttgatttaaataaagACTGTGAGGACATGAGTAGAAATGAACTTCTACAAAAAATAGCTATGTTAGAACAAaaagtAAAACAAAGTGAAAAATTGGATGGAAGTTGTATAGATCATCCTAACAAAGATAAATCTGGTGAAGATTTGCATGAAAaaAGCATTGAACTTAGAGGTTCTTTGCCTcaacaaataaaacaacttcGTTCACGAGAAAAAGAGCTACTTGAACAGATAGACTGCTTAGAAAGTTCAGTTGCTAAATTAAAAGAAGATCGAACACATTATAGAAAAATGACAGATGATTTAAgACAACAAATTgaggcaaataaaaaaacacctGTTACTTTGCAATCAAGAACAAGTACagtagaaaatgaaacaaaaatatctaaCGACATTAGaaaaaagtcaCTCATGCAAAAATCTTTGCCTGAAAATCTTAAGGAAGCTAAGTTTACGAATGAGAGAGCTGAGTTGGTAAAGGAAGAGAGACTGAATGCCTTAAAAGAAAATGAAGCAGCAACAACAATACAAAGAAGTTGGAGAAACCGAAAGAACAAAATGgaaaaagcTCAAAACAATTATGAAGAAATATTAATCAATagTGTCATTGAAATTCAAGCTGCATTAAAAGGTCATCTTGCTCGGCAGAAATTTATTGATTCCATTAATGAAGACAAAAATAAGAgtggagttttaaaaaatcttttaaagaaggAACCATATGAAAGTGATGTATTGCTTATTCAGTCCGCTTTTAGAGCTCACGCAGTTCGGAGTCAGTTtctgaataaaaacaaaaaTGATGAAGAAAAACAAGTAAATAAGGTGGAAAatcatgctaaaaaaaataaaaaagGTATGTACCATTCTTCTGCTGACAAAGAGAACAATGTTAAATCAAATGACGAATTGAGTAATATTGATtctgatgaagatgatgatgtgGTGGTAGGGAGCAGTGTGAGTCTCTCAAAATATAGAAACAACCAAAAATCTTCTTATAATATTAATGATTCTAAAACTCAGCCTGAAAAAGAAtctaaagaaaataatgaaaaatcaTATAAGAATAATGGaagatcaaatttaaaatcttcttttgATACCGATCACAAAAACCAACAGAAACATAAAGATTCTCATGATAAGCCAAGGTCCAAAGGATCTTTAGAATTATTTGTTGATAGTGACAGCTTGCATGATAAAAAAAGCCGTAAAATGACTcaagcaacTTCTGTTACGCAATTAAAAGCATCATCGAACCCTTGGTCAAATAACTCAAAATTGATCAGTAATGAATATGacgatgatgaagatgatgacgAAAATGATGAGTTAGTATGCACCTCAACATTAGGTAGAAAGCAAGATAAGTTAAAGAAGGAAACAGcttcaaaaaaagataaagatGAACTTGCAATGAAATGGGCAAGCAGTGGTTtgcaaagtaaaaaatctaAGGACGCAATTTTAGACAATAAACATTCTCAACTTCAGACCTCCATAAAAAATGCTACTGATGACAATATCAAACCGCATCAAGTTCAGAGAAAATTAGTTAAAAGCAAATTTGCACTTGATGAcgagcttttttaattttatatgattttagttgtcaaaatgatttttatatattttgtttattataaatatatgtgtatataaaatttatagataatgtatgtgtatatatttatattgaataataatattgcTCAAAGca

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00612	IQ	IQ calmodulin-binding motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000048	Binding_site	IQ motif, EF-hand binding site	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24677	IQCE; IQ domain-contaning protein E	-	Cilium and associated proteins	ko03037	deepkoala