Gene detail

Detailed information of XP_066911782.1 in Clytia hemisphaerica

Genomic Location: NW_027103507.1:2226631...2229540
NR annotation: KAI8480036.1, hypothetical protein Bbelb_422440 [Branchiostoma belcheri]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_066911782.1

ATGACAAAGTCCATTCGAAGCACCAAGGTTAAAGCCCTTGATCCTCTACTTGACGCATCAAGTCTTGACGAAAGTACCCTATCGTCCCATGACGAACCAGCTCTCAATCCTTCTGGAAGACCTGATTCTAATAGAACTCGACGTGTCAAGCTATCCAAACCCTCTCAATCGTACAAAACTGGTACGTTAAACTGCAGAACTCTTTCAACCATATCTTCGCGTAAAGAACTTAACCATCTTGTGTCAAAACACGATATCAAAATACTCTGTGTCCAAGAACACCGTTACGTTCATAAACCGAGCGATCCTGAAATTGTTTCCCATGACCTTGGCAATTGCACACTCTTTACATCCTCAGCCACAAGAAATGAGCAAGGAGCATCCATTCACGGTGTTGGCATTGTAGTCCACTCTTCCATTCTACCCTTACTAACTTTTGTAGACTCTATTGACGAGAATATTATGATCGCTGTCTTCAAAGGCAACCCAAAAACGTGTGTCTTGTCCTGCTACTCACCTCACAACTCGAGACCTGAACAAGAGGTCATTGACTTCTACGAAACTCTTGATCTGATAACTGAAGCCATACCTCATCACAACATGTTACTAATCCAAGGAGATTTCAATGCTAGACTAGAAGGCAAATTTTCCTTCCATGATGATTTTAACAGAAACGGCAAATATTTACGCGAATTCGCAGAACAACATAATCTGGTCGTAGGCAACATCACTTTTCAAAAGCCTCGCAAAAAGCTCTGGACCTGGCGCTCACCACGTGGAGATCTTGCACAGATAGACTACTGCATGTATAGGAAACGTTGGCGAAACAGCATCCCCAACTGCCAAGCTTACTCGTCTTCCAATCCAATTGGAAGTGATCATCGCATTGTATCGACTACGATTCAAATGAGTTTCCGAACACCAAAGCCTAACCGGTCAAAACGTCTTAATTGGCAAGCCATACGAAATGACATAGATCTTGGCACTAGGATCGGTGCAAACATTGCTGCTAAGTTCAAAGCTCTTCCTGATATGTCAAAAAACTACTCAGAATTTTTGAAAGTATCTAACCAAGAAGGCCTTCTTCATCTTCCTAAGAAGAAAATTGAAGCTCCTGTCTCAGAAGATATCCTCGAGAATCGATTACTGCGCCAGTCCAAAGCATCCAAGCCAAACAACAAAATATTAAAACAACTCACGATGATCTTGAAGAGAAAAGAATCAACGACACGCTCAAATTATTCGAAATTTTGCAATTCTGCTTACCATGGTGACAGACCAACTGAATGGGGACTTCTTAAACTGATTCCTGTGCCAAAAAAAGGTGATTTATCTAAACCCGACAATTATCGCGGTATCTCTCTTGCACAGACAGCATCAAAGATTTTTAATCGTCTTATTCTAAATCGTATAAGACCGGCCATTGACAAAGTTTTGAGACCTAACCAAAACGGGTTTCGTGAAAATCGATCAACTTCGTCCCATCTACTCGCCCTTCGTAGACTTATAGAAGAGCTAAAAAATCACAAACAAGAAGCTGTCCTTGTATTCATCGATTTCAAAAAGGCTTTTGACTCGATCATAAGAGACAAGATGTTCTCTATATTAGAGGCCTATGGTATACCACTTGAAACTGTCAACGCAATAAGGACTTCTTACAGAGATACATCATGTTACGTTTCCACCCCTGATGGCGACTCAGATCCTTTTAAAATCGTGACTGGAGTTTTGCAAGGTGATCCATTGGCACCCTTTTTATTCATCATTTGTCTAGACTACGCTATGAGATCTGCAATCCTTGATACAGACGGAATAGTTTTGAAACGTAGGAGAAGCAGAAGACATCCTCCACTACTTCTTAGTGATTTAGACTTCGCTGACGACATCGCATTGATCGAAGAAACCATCAAAAAGGCACAAGATCTCCTACATCGCGTTGAAACTGATTGCCAGCGGGTTGGTCTTTATCTGAATCCAAAGAAAACAAAGTATATGCTTGTGAACTCGAATGATTCTTCCCCTTTAAAAACTTCAAACGATAGTATCATTGAAAAAGTCGATGATTTTACCTACCTGGGTGGTCTGACAAACACTGCTAACGACATGAATGTACGGATTGGAAAAGCTTGGGGCGCAGTAAACGCCCTGACTAAAGTATGGAAGTCTCCAGTTAATAAGAAAACAAAAATAAAGGTTTTCAGACAAACAGCCGAATCAATATTGCTCTATGGATCTGATTCTTGGACCATGACAAAGACCCTTGCAAAATCCCTTGATGGAAAATACACAAAAATGCTGAGAGTTGTCTGCAACGTACCTCCAACGACACGTATGTCTAACAAAGTCCTTTATGGAAACATTCCTCCAATCTCTGCAACAATACGAAAACGTCGACTTGCTCTCGCCGGTCACGTAGCACGTCGAGAAGAGCCCGCCTCGCAGCTATTGATGTGGTCACCCGACTCGAAGAGAAAGACTGGAAGACCTTTCACTACCTTGAAAAGTGTCATACTTGAGGATACTGGTTTAACAAAGAAAGAAGCGATCAACATCATGAAAGACAGAGAAGCTTGGAGAAAATTTGTCGTAGCTTCACCCTCTCGCTGA

Transcript

Protein

Uniprot

Uniprot term	Description
Q95SX7	Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan