Gene detail

Detailed information of XP_066912060.1 in Clytia hemisphaerica

Genomic Location: NW_027103512.1:951785...976597
NR annotation: XP_047145713.1, nodal modulator 1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_066912060.1

ATGAAAGTATTGTCACTAGCAGTTGCTTGCTTGATAGCATCCTTTTTGTTGATACAATGTAATGGTCAAGATGTTGTTGGATGTGGTGGTTTTGTAGAATCTCCAATCCCAATTAAATTTGAACAAGTTGAGATTAAGCTTTACACCAAACAAGGAGCTTTCAAATCCAAAACAGAATGTGCTCCTAAAAATGGATATTTCTTGGTTGCAATTTATGATAAGGGAGAATACGTTTTGAAGATTTCTCCTCCAGAAGGCTGGGGTTTTAAACCACAAGAAATTGAATTGAATATTGACGGAAACGACCCATGCTCAAAGGGAGAAGATTTGAACTTTAAATTCTCTGGCTTCACTGTCTCTGGCAATGTTCTCAGTCTTGGAAAAGAAACTGGACCATCTGGTGTCAACGTTCACTTAAAAAATTCTGAAGGGAAAGTGATCAGTGAGACGACCACCAGCGACAGTGGAAGCTACACATTCCCAGATATCATGCCAGGAAATTACATTTCTGAAGCTTCACATCCAACTTGGACTTTGACCAATAATCGTATACAATTGAATGTTTTGGAGGACAATGTGAAAATAGAAAGCATCCTTGTTTCAGGATACGATGTCAAGGGCCATGTGCTCAGCAGTGGAGAACCCATTCAGGATGTTGTTTTCATACTATTCTCAAATGAAAAGAAGAGTGTCAAGAATTGTCAAGAAGTTCCCAAAGAGTATCTTGCTGCAAATAAGATTGACCAGAATGAGATTCCATTGTGTTCTGTCAAATCACAAGCTGATGGTTCCTTTGTTTTTCCAAGTGTTCCAAGTGGATCCTACAACCTGGTCCCTTTCTATACAGCTCAGAATATCGTATTTGACATTGTTCCAGGGAAACTTGCATTTTCTGTCAATTTGAAAAGCGTGATGATGAAGACCCCATTTCAAGTGTATGGATTTTCTGTGAAAGGAAAAGTTATCGATACAATCAAATCAGGAATCGGTGGCGTAGAAATTGTAGTTACCAATGATGCAGGAGAATCAAGAACGGCTCTCACTTCTGATAATGGTGAATACATGCTGGAAAATATCACCACTGGGCATTACACATTCAAACTTTCCAAAGAAAATTACATTTTTGAAGAAAGTAAAACTCACATCAGCCCAAATGTTCCAACCTTGAAAGATATAGTAGCAAATGAGTATAAAATCTGTGGATCTATTGTCATCAAGCAAATGCCACCTGGTGTTCGACAACTATCACAACTGAAGGTTTTACTTCAACCTGTGGATCAGAAAGATGGCAAACCAAAATCAACTGCTGTCACTAAAAATGGTCACTTCTGTTTCCAAAGTACACCTGGGAAATTTAGGGTTGAGATACCAATCATTGAGAGTGAAGCAAAAGCCGGCCTCCGATTACGTCCAACACATGTCGATGTCCATTTGGTCAACAAACCACTGACTGATATCAAATTCGAACAATTCTTGGCGACTGTCTTTGGAGATATTCATTGTATCAAAGAGTGCAGTGACGTTTCAGTGTATTTGATGCCATCAGAAAGTTCCTCAGCTCTCAAGTTACCTGGAACCGTGGAGGGAGCTGGCTCCAAATTGTCATTCTCTATCCCCGATGTATTGCCTGGAAAATATAAACTGATTCCGAAACGGAAAAATTGGTGCTGGGAAGATCAACAGCAAACGATTGAGATCAACGACCAAGACATTCGAAATGTCCAACTCAAACATTCTGGTTACCACTTGAAATGCTCCATCTCGCACAACATCTCACTGAATTTTGCACTGGAGGGTGAGAAGGAGCAATTGGGTTCATTCGAGTTGAAGAAAGGAAACAATCAATTCTGTTTGAAAACTCCTGGAACTTACGTCCTGAAACCAGTGTCGTGTTATCGTTTCGAGCATGATGAATACATTTACAAAACGGAGGAGCCACAGACACTTTCGTTGAAGGTAGCTTTCTATAAAACAGACTACACCATCAGAACAACCAAGAATGTCACTGACCTCGCACTCCAAATCAAATCCCAATCGTCTGGTCAAATTGAAACCAAAACACCAGTGTACCAAGGTGCCGAAGAAAGATTTTCCGTCTACAAGATTCAAACATGGGGAAAGTTATCAGAGGAGTTAGAATTAACACCACAATCAAAAGAAGTATTGTTCACTCCACCATCTCTTGTCACCACTATTTCAGAAAGTTGCCCTGGAGCAACAGCTGATTTCGAAGGTCACGAAGGAATCTTTATCCAAGGAGACATTACTCCACCATTTGCTGACGTTTCTGTGACCATCAAGATATTGCAAGGTACAGGTGACGAGAAACAAGTGGAACGAACCATTGAAGTGATGACTGATGCTAAAGGGGCTTACAGAGTTGGGCCAATGCATGGAGGGACCCAATATGAAGTATCAGCAGTGAAGGATGGCTATCATATCACACCTGTCGCAAACAAGAAAGGAAGTTTCATTGCTCAAAAACTCGGCCACATTTCTGTACTGGTGTTGGATGAGCGAGGCAAAGGAATGGAGAACGTTTTATTATCATTGAGCGGACGTCAATATCGCAACAACAATCTGACCAACAAAGATGGCACATTCTTGTTCTCAAACTTGGGTCCAGGTGAATACTTCTTACGACCGATGCAGAAGGAATACAGCTTTGAAGCGTCATCACAAACCATCAGTGTGACTGAAGGACAAGATATCGTGATCAACATCAAAGGAAAAAGAGTTGCTTTCAGCTGTAGCGGCTCAGTAACATCATTAGCCGGTGTTCCTGAAGAGAAGATCGCTATTGAGGCTGTTGGTTTACACAAATGCTCTGAGTACCACGAGTCTACCATTTCCGATGCCAACGGTGATTTCCGTATTCGTGGATTGCAGCCTGGATGTTCTTACAATGTCCGATTGATGCGGAACGAGGCTAATGAAGGAGTTGAAAGATTAGCCCCTGATAACCATGTAATTCAAGTGCAACAAGAGGACGTGACGGGAGTTCACTTCTTGGCTTTCATGAAACCAACCAAGTTCGTTCTGACCGCTCACCTTGATACTGAAGATAAACTCCTCTCTACAATTAAGGTGTTATTGTACGAGGAAGATGACTTGGATTCACCGGTTCATTCCATCAGCCCTGGTGTCGTCAAATTCATTCAATTCCCTGCGTTGAAACCAAAGACCTACATTATCAAAGTGCAATCGACGCTTTCTGGCCGCTCGCACGACATTGTGACGTCATCAGCTACCATTAAACCCGATGCCGATTTGGGAAAGAAACACGTCAACTTGAAATTCGAAGCAAAGGAGAAGAACGTGGATTTGGAGCCAACACAATCAGTGATCACGCTTCCGTTGGCCGTCGCTCTCCTTTTCCTCGCCTATAATTATGACTCTGTGATCACCTTTTTGACTAAAGTGAATATCTTCCTTCAAACGTTGAGTGGAAACAAACAAGAGGGCGTAGATGGCGTTGAAGAAACACCCGAAGATTATTTCCAACCCGCCCATACTGGAGGTCGGTTGACAAAGCGTAAGAAGCGCTAA

Transcript

Protein

Uniprot

Uniprot term	Description
Q15155	BOS complex subunit NOMO1 OS=Homo sapiens OX=9606 GN=NOMO1 PE=1 SV=5
P69849	BOS complex subunit NOMO3 OS=Homo sapiens OX=9606 GN=NOMO3 PE=1 SV=2
Q5JPE7	BOS complex subunit NOMO2 OS=Homo sapiens OX=9606 GN=NOMO2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13620	CarboxypepD_reg	Carboxypeptidase regulatory-like domain	Domain	Interproscan
PF17210	SdrD_B	SdrD B-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051417	Family	Serine-Aspartate Repeat-Containing	Interproscan
IPR008969	Homologous_superfamily	Carboxypeptidase-like, regulatory domain superfamily	Interproscan
IPR033764	Domain	SD-repeat containing protein, B domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013784	Homologous_superfamily	Carbohydrate-binding-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23303	CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K26500	NOMO1_2_3; BOS complex subunit NOMO	-	Membrane trafficking	ko04131	deepkoala