Gene detail

Detailed information of XP_066912647.1 in Clytia hemisphaerica

Genomic Location: NW_027103262.1:612735...627381
NR annotation: XP_047123371.1, protein SEC13 homolog [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q3ZCC9	Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1
P55735	Protein SEC13 homolog OS=Homo sapiens OX=9606 GN=SEC13 PE=1 SV=3
Q5XFW8	Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR037363	Family	Sec13/Seh1 family	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11024	NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005198	Molecular Function	structural molecule activity	Interproscan
GO:0006606	Biological Process	protein import into nucleus	Interproscan
GO:0030127	Cellular Component	COPII vesicle coat	Interproscan
GO:0031080	Cellular Component	nuclear pore outer ring	Interproscan
GO:0032008	Biological Process	positive regulation of TOR signaling	Interproscan
GO:0032527	Biological Process	protein exit from endoplasmic reticulum	Interproscan
GO:0090114	Biological Process	COPII-coated vesicle budding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14004	SEC13; protein transport protein SEC13	-	Membrane trafficking	ko04131	deepkoala