Gene detail

Detailed information of XP_066913884.1 in Clytia hemisphaerica

Genomic Location: NW_027103573.1:582571...619117
NR annotation: XP_047126049.1, protein virilizer homolog isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_066913884.1

ATGGATGATAAACCTTGCTTGTTGTTCTGCGATACCTTCGTTCATGAAAGTCACGATGAAATTCAACTGGATTTGATTGGATTTGCTCGACCTGTGGCAATCTCAGAGATTAGAGTCATTCCAAAAGGTTGTAAAGTTCACCCAGAAATCAATGATCGGTTAGGTGAAACCAAACCATCGTCTTTCAAATTGGAATTATTCATCAAGAATTTATCTCAACCAAGAGCAGCAGTATTTGAAAAGTTGGGGATACTTGATTATGAAGAAGGGAAAAGCATACAGCTCATTTCAAATTCAAAGATTCCAACAAATGTTGTTTTGGTCAGAGGCTGTTACCATAACTTGACCATAAGTATTTATGGAAATTTTGCTAACTTCCAAATGGACCCTTCAAGCCAAGTACCACCACCCCCACCCCAGCATGAAATCAACCGCCCAATGATTCACATGGACGCCCCAATGCCTGTAACTGGTCTTCCACCGGCAGTAAACATTGGTAACCAAGTACCTCCACAACAGCCCATGCCCAACGTTCCATCAGTGTTTCTGCCACCTGGTCCTGATGGTCCGCCCCATATGCCACCGCCACAGAACTTTCCCCCTCCGCCACACATGGATATGCATGGTGGTTACCCTCCTAACCAAAGATTCGAGAACGATCACGATGTTGGTCGTGGCGACCGTGATTATGATCGCGACTACGATCGTGACAGAGATTTTGGGCGTCGTGGCGGTGGTGGTGGTGGTGGTGGTGGTGGTGTTGTTGGAAGATACAATCCCATACAAAACGAACAAGAATCACTGGACTACCAAAGAGAGAAGGAAAGACTTGAACGGCGACACATGAGAGATCGGGAGCGATTTGAGGAGAGGAGACGGGAGCGTCGCGACTACGATCGTAAAGGAGATTACAAGAATGATCGTAACGATCGCAACAACGATCGGAGTAATTATGACCGATTCTCAGAGAAGCGGAGGAGACACGATGATGAGCCATCCACCAGAGATTCACAACAATCTGAACAAAATTCCAACCAGAATACAAGCCGTGATTTTTCTGAAACACAAAGTCCATCTTCGAAAGATTTTAATGAGAGTGCTAAAGATTCGGACAATACTCCATCCAAGCCGTCTGATGATTTGGTCGGCGGGTTCGAAATGATAGACAGTGACGAGGAGATCATTTTCGAGGACAGCGAGTTTGATGACAATCAGCTACAACACGATTACGAAATGTTAGATGATAACTGGACATCTATTTCAATGATGTTCAACCCGTACCAAACTCAAGTTAAAAAATTGAAGAATATTGAAATAGTGGAGAGAAGCGATTTTGAGATTCTAGTTGAAGATTATAAGAAGACATTGGATTTGAAAGAACCACCACAGGTGAAACAACTTCAAGATTACGTGGTGCTGGACAGTGAAGCTGAAAGAGACACCAAATGGGTTACCATGTTGGATGAACTCCCAAATATCATTCCAACAGCCATGGCGTACTTGAGATCACAACCTTCCATGAAAATGAAAGAAAAACATTTCGCGTCCATCATCACCGAATGGGCAATCTACGCTTTGAATATGGACAAAGTCTGCTCCTTACCCTTGGCTGCTAACATCCGATTCTTGAAGGCTGGACTGAAACTGACAACTCTGCTTGCCTCGTCCTGTCAAGAGTACCAAAAGCTGTTGATCACGAGCAACGTCCAGCAGAAACTCTTAGTGTTATTGAAGTCACAACACATGGCATCGTCATTAAAACTGCTCATCTTAAGAGCAATGGATGCGTGTACCAACACGTCCGCTGGCATGGAAAGTTTCTTGGGATGGAACAGACCGAAAGAGGAGTCTGGTGAACAGACGGACAGTATCTACGAAGAGCTCATTCAATTCGTATTGGAACAATCTACAGTTCGAATCACGGCTTCCATCAAAGCTCTACTTCAGAAAGCACATTTCTACGAAAGTCTCTCCAACCTTCAATCGATCTCTTCAAGAATCAGTAAGAGTGACACCAAGAAGATTGTAGTTGATGATATCAATATGGACCAACAACAACAAGATAATGTCACACCAAGTGAAAAAGAAGGAGAAGGACCCACCACTGAAGGTACTGGTGAAAACTCTGGCGAAAACACCAGCAGTAAACAACAAATGAAGACTTGTATAGCACTGGAGATCAACCATAAAGACATGTCAGACGTCTTATCAGCTATCGATAACATTCATAAAGTTTTTGAGAATGGCAAAGAAATGATCGGCCAACCAGGACTACGAAGTTTTCCTACCACGGTAAAAGTGCAATCAGACCTCAAAGAAGATTGTTACTCTACGGTTGTTCTATTGTTGAAAGGCAGACGTTTCTTGGAGAGCATTTTGATCCTGGCTTCCTCGCCCTTGTTCTGTGAACCGCCCTTGTATTCGGCGATACGAAACCTCATTTTCATGCTGTTATCCACATACAAAGGTCTTCTATTCCTATCAAGCGATCCGGCAACGGTGAACGGTCTGGTCCGTGTTTTATTATCCACCGAAGAAGAAGAATATAGCCTGATGCCAACTCTCCAACATTTTCTCTTCAGTAGTGAGCTGGCTGAACAGTGCTCACCTCATCAGCTAGGAATGTTATTGGTTTTCCATTTACAAAGTTTACAACTCATCGACCAATTGCAAACTGATCTCAAACCAGAAATGGCAGTATTAGAAATGGACACACCGGAACATATTGAGGTTCTCCACATGATGTATGCTATCTGCTTTACACATATTGGTCGTGAGAGTTTATCGCACGTTTTATCGTTGGACAACAATCTATCATGTTTGATTCCCTTCTTGACTTGTAAAGAGGAGCTGGACGGAAAAGTGAAGAAGTCTGTTTGTTGCCGTTACTCTGGTGTCCTGTTGAACACCATGTTCTACCATTCTTATAATGTGGGATATGTTCAAAGATTCGGCCCTCAACTCCTCACTATACCTAAAAAAGAGAATGACCGAGTACAAGACGACATTCATCATTTCATCGCACCACTCGAAAAATTCAACAAACTCGACGTACAAGCTGTGGTACCATTAGTGGAGCTGTTGAGAACTGAACTAGAAGAAATCAAACTTGGTTCGTTATCTTTGCGAATTGTTCTCATGTCATTGCGCTTGCTGAAGCATCTAATGAACGACAAACCAAATGCAAAGCTTGAAGGAAGTCAAAAAGATTTACAACAAAAGTTTATCGTCATGCAAATGATGTCTGCAAACGCCATGGATGTTTTTGTGACGCTTTTCCACAAATGTTGTGAACAGTTAGCGGCGCCATGGAAACAAAACGAACCTTTCTCTAACCCACAATGCACCATTTTCGTCAACATCATGCATCCTTTGCTAGAGCTTTCCCAGTGTCTCTTACAAAGCTTATCCACCACTACGTTTTGCTTCAAAGACGCCCGCCTCGTACAAGAACTGTTTACACTGCATAAAATCTTGTGTACTAAACCGCCCTTCGGTTTCTTGTCCGCCATCTTGACCGACATTCAGGAGAAGATCATCTCATTGTTGGTGGTTTTCATGCAAGGAACAAAAGAGGCACCGCAATCAGAAGAAGCGGTCAAAACGAGCACTTGGTACATCTTGTTCAAAGAGCTGTTGGTATTTGCCGCTGCCAAACCGGAAAACTTCACTACCGGATTAATTCTACTATCGGAACTGTTACCAATTCCGCTGCCTGTCCATACTTTACAAGATCTGTCTGAGGATGAAGTGTCCAAGGTGATGAGTCACCGATTGTTTTCGATGGCGAATTTCAGTTGTTTGGGGGTGGAAATCAAGGCGTTATTGAAGAACACCATCGGCTCCTGTTGTTCCGCCCTGCAGTATTACTTGAGACGTGTGCTTTGTCAATTGGTCGACCTTGGTGCTTCTGTTTCTTCCCTCATTGTCAGATGCTTATGCGAGATGGTGGACGAGGCGATGGCCCAAATATTGACAACGTCCGATCCGCCCACAGAAGAAAATGCCGCCACAACGTCTGAGGTGGAGAAAGAAAAAGACGCGACGCCATCTTCAACCGAGGACAAAAAACGTTCTTTATCGCCGTTCATCTACAACACTTTTTCTATGCTCTCCTATATTGTATGTCAACCAGGGGGTAAAGCTGCTTTCCTCAACGCCGTGACGTCATCACCGGGAATAATGGTAGCTGAGTTCCCTGCTTTTATTCCCAATGCGATTGCTCTCCAAGCTAAAGAGCCAGACTGGTTTTACCTTGAGAATTGCCTTCTCCCGATCCTACATTCGATCTGTGATCATCAGGTGTGTCTAACTCAAACCAATGACGTCATCACTTCCCAACACTTAGCCAATCATCTTCCCCAAGGGGATTTCATGGAAGCCATTGTGGAATTCTGTTTCCAATTGACTGCCAACCACGCTTTACCGGTACCGTTATTGATGCGATGTTTGGATATGCTTGAATCGCTAACGGAACACGACTACGGGATGCAGTACATACGGAAATCCTTGGATGTGAAAGGGGATGTGTTGAACAGTGTCCTGCTTCGTTTATACAACGGACTCTCCAATGAAGAAAACTTGGGTCCAATCTACAATTCTGTATCTGCTTTCCTGGATTTCTTAAATTTACTGACCGGCTCTGGTCTTGAAAATTTCAATTTGAAATCTTCAAACGATGCCGACATGCCTGACGAAGAGAAAAGTAAAAGTGTACAATCTGCAGACCAGAATGTTGGTGAAGAGAAGATGGAGACTGATAAGGAGCCGTTAAGAAGAAGCATCTTTATTCGGGTCAACCAATTGAAAGATATTTTTCAACTGGATGGAGAAGCGGCCAAGGAAAGCTCGCTAACCAAAATGGAGAAGATTATAGAGGAGAGGAGTCACGAAGACGAAGAGTTGAGTTCGTTAGCGGAAAGTATTTTGACATTACGCATGATCCTCATCGCTTCGCCTACAAAGAAAGATGAACGAGAACAGGATCAGAAGCCAGAAGAAGATACAACACCAATGATTAATTTACCGGCACCGACCACAGTGAAAGAACAATTCAATTCTCGCCTCGTTTCCATTCTGGTCAACATGATGGAAGCTGAACGCTCAGCCAATCAGAACGATTGGTTTGACGCTCCAGTCCCCGAAGAAATTGACCCTGAATCCATCAACGAGGCGATCAGAGTAGACTTGTTGGCCATCTCAGAGAAGAATTTACCGAATTTCAATTTCAAAGAAGAGATCAAGAAAGGCTTTGTTAATACTACTGAAATGAAACGCTCTAAGAGATCAAAGATGGCGTATTCGAAACCTGGCAAACAGATCGATGACATCAAACGATTGCGATTTGACGCATCTGCACTGGACAAGAAACCAGATATGAGGGCGTTTGGGCGTGGTTCCAACCGTGGCATGAACCGCCCGTTCTTTAACAACCAAAACAACTTCCGTGGAAGAGGACGAGGGCGCGGTAGGGGAAGAGGGCGTGGTTCGGACGATGCATTCCGCCAGCGCCGCCAAAATACGTCACGCCCTCCTTCCATGCACGTTGATGACTTTATGACGATGGAGAGTAAAGGAGATACAATCATGTCACAATCGCTAGGCAATCAAAATCAACAACAATCGAAGAATCAGAACAATGATCGCTACTCTTCTTCTTCAACGAGCAACGCGTATGGTTCTGAACAACATCAAGGTCGATGGAACCATAATAACACTTACGGAAATCAAAACTTCCGCAGGTCCAATGATAATCTCAATTCGAATCGAAACAATGATGGATTTAACCGGCAGAACTTTGGCGGAAACCGCGGAGGTGGCGGGCGCTTTCATAACCGGTCGAATTCTGATTGGAGTAATAAAGGAGGTGGTGGTGGTGGTTACAACACGCACAGGGGATCACGTGACAATGGCGGCGGCAGTGGCGGTGGTGGTCAATACAACAACCGCCAGAACAATCGAGGCGGTGGAGGAGGTTATTGGGTGGGTCCCAAACAAAATAACAATGACAGGTTCGGAGGGAATTATCGACCGAATCGAGGTCGTCATCAAAGAACCTTTACGAGATAA

Transcript

Protein

XP_066913884.1

MDDKPCLLFCDTFVHESHDEIQLDLIGFARPVAISEIRVIPKGCKVHPEINDRLGETKPSSFKLELFIKNLSQPRAAVFEKLGILDYEEGKSIQLISNSKIPTNVVLVRGCYHNLTISIYGNFANFQMDPSSQVPPPPPQHEINRPMIHMDAPMPVTGLPPAVNIGNQVPPQQPMPNVPSVFLPPGPDGPPHMPPPQNFPPPPHMDMHGGYPPNQRFENDHDVGRGDRDYDRDYDRDRDFGRRGGGGGGGGGGVVGRYNPIQNEQESLDYQREKERLERRHMRDRERFEERRRERRDYDRKGDYKNDRNDRNNDRSNYDRFSEKRRRHDDEPSTRDSQQSEQNSNQNTSRDFSETQSPSSKDFNESAKDSDNTPSKPSDDLVGGFEMIDSDEEIIFEDSEFDDNQLQHDYEMLDDNWTSISMMFNPYQTQVKKLKNIEIVERSDFEILVEDYKKTLDLKEPPQVKQLQDYVVLDSEAERDTKWVTMLDELPNIIPTAMAYLRSQPSMKMKEKHFASIITEWAIYALNMDKVCSLPLAANIRFLKAGLKLTTLLASSCQEYQKLLITSNVQQKLLVLLKSQHMASSLKLLILRAMDACTNTSAGMESFLGWNRPKEESGEQTDSIYEELIQFVLEQSTVRITASIKALLQKAHFYESLSNLQSISSRISKSDTKKIVVDDINMDQQQQDNVTPSEKEGEGPTTEGTGENSGENTSSKQQMKTCIALEINHKDMSDVLSAIDNIHKVFENGKEMIGQPGLRSFPTTVKVQSDLKEDCYSTVVLLLKGRRFLESILILASSPLFCEPPLYSAIRNLIFMLLSTYKGLLFLSSDPATVNGLVRVLLSTEEEEYSLMPTLQHFLFSSELAEQCSPHQLGMLLVFHLQSLQLIDQLQTDLKPEMAVLEMDTPEHIEVLHMMYAICFTHIGRESLSHVLSLDNNLSCLIPFLTCKEELDGKVKKSVCCRYSGVLLNTMFYHSYNVGYVQRFGPQLLTIPKKENDRVQDDIHHFIAPLEKFNKLDVQAVVPLVELLRTELEEIKLGSLSLRIVLMSLRLLKHLMNDKPNAKLEGSQKDLQQKFIVMQMMSANAMDVFVTLFHKCCEQLAAPWKQNEPFSNPQCTIFVNIMHPLLELSQCLLQSLSTTTFCFKDARLVQELFTLHKILCTKPPFGFLSAILTDIQEKIISLLVVFMQGTKEAPQSEEAVKTSTWYILFKELLVFAAAKPENFTTGLILLSELLPIPLPVHTLQDLSEDEVSKVMSHRLFSMANFSCLGVEIKALLKNTIGSCCSALQYYLRRVLCQLVDLGASVSSLIVRCLCEMVDEAMAQILTTSDPPTEENAATTSEVEKEKDATPSSTEDKKRSLSPFIYNTFSMLSYIVCQPGGKAAFLNAVTSSPGIMVAEFPAFIPNAIALQAKEPDWFYLENCLLPILHSICDHQVCLTQTNDVITSQHLANHLPQGDFMEAIVEFCFQLTANHALPVPLLMRCLDMLESLTEHDYGMQYIRKSLDVKGDVLNSVLLRLYNGLSNEENLGPIYNSVSAFLDFLNLLTGSGLENFNLKSSNDADMPDEEKSKSVQSADQNVGEEKMETDKEPLRRSIFIRVNQLKDIFQLDGEAAKESSLTKMEKIIEERSHEDEELSSLAESILTLRMILIASPTKKDEREQDQKPEEDTTPMINLPAPTTVKEQFNSRLVSILVNMMEAERSANQNDWFDAPVPEEIDPESINEAIRVDLLAISEKNLPNFNFKEEIKKGFVNTTEMKRSKRSKMAYSKPGKQIDDIKRLRFDASALDKKPDMRAFGRGSNRGMNRPFFNNQNNFRGRGRGRGRGRGRGSDDAFRQRRQNTSRPPSMHVDDFMTMESKGDTIMSQSLGNQNQQQSKNQNNDRYSSSSTSNAYGSEQHQGRWNHNNTYGNQNFRRSNDNLNSNRNNDGFNRQNFGGNRGGGGRFHNRSNSDWSNKGGGGGGYNTHRGSRDNGGGSGGGGQYNNRQNNRGGGGGYWVGPKQNNNDRFGGNYRPNRGRHQRTFTR

Uniprot

Uniprot term	Description
Q69YN4	Protein virilizer homolog OS=Homo sapiens OX=9606 GN=VIRMA PE=1 SV=2
A2AIV2	Protein virilizer homolog OS=Mus musculus OX=10090 GN=Virma PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15912	VIR_N	Virilizer, N-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031801	Domain	Virilizer, N-terminal	Interproscan
IPR026736	Family	Protein virilizer	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23185	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0036396	Cellular Component	RNA N6-methyladenosine methyltransferase complex	Interproscan
GO:0080009	Biological Process	obsolete mRNA methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22910	VIRMA; protein virilizer	-	Messenger RNA biogenesis	ko03019	deepkoala