Gene detail

Detailed information of XP_066915607.1 in Clytia hemisphaerica

Genomic Location: NW_027103638.1:613729...627924
NR annotation: XP_047139276.1, activated CDC42 kinase 1 isoform X1 [Hydra vulgaris]
Species abbreviation CHEMI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_066915607.1

ATGAGTTTGTCAAGTGAACAGCAGCAGTTACAAGATTTTTTAAACAAAATACAACTGATCCAATTCTATGAAATAATTTCAAATAAATTACATATTACGAGATTAGAGCACTTTGAATATGCCACTGAATCAGACTTCACATGTATTGGCATGTCGATGCCGGAAATTCGACGTTTATTCGATTCGTTGAAAAAGAACAAGAAAAAGTTTTTCTTGACGAAGTTAAAGAAATCGTTTCGACTATCAAGCTCAAGCAACAATTTACAAGATGTTTCTCTGCAAGATAATGCCACACAATCAATTCAAAATACTAACATCCCCAGTGTTCCTGAAGACCAGAAAAGCCCGAGACAAGAGGCTAAATGCTTGATACAAGAGAAAGACATAAGGTTTTTGGAAGTGATTGGTAAAGGGGCTTTCGGTTCAGTCCGAAGTGCAGAATGGATAACTGTAGATAACGAAAAAATTTTTGTAGCAGTGAAATGTATTAGAAGAACAACTGGAAATGGCATAACAGATATTCAAAATGAAGTAGTGAAAGAAGCAAGTGCTATGAGTTGTTTGAATCATCCAAATCTCATTCGATTGTTTGGTGTTCTCATCTCAACTCCAATGATGTTGGTAACAGAACTTGCACCACTGGGAACATTACTGAAGAGGCTTCGACAAGAAAGACATAAGTTCCAAATCTCAATACTGAGCAGCTTTTTGGTCCAAATTTCAGCTGGTATGAAATATTTGGAAAGGAATAAAATTGTACATAGAGATTTGGCAGCAAGAAACATTCTTTTGGTATCATATGAAAAGATAAAGATTGGTGATTTTGGGCTAGCAAGGCCACTAGACGATGATGTTGAGCATTACGTCATGCACCCTGATGGCTTGATACCTTTCGCTTGGTGTGCTCCAGAATGTTTGAAATACAAACGTTTCTCGCATGCCTCAGATGTTTGGGCTTTCGGAATCACCGCTTACGAGATTTTCACATACGGTGCTGAACCATGGGCTGGCCTCAATGGTGGTCAGATCCTTGAGAAGATCGAAGAGCCAAACAACGAAAGACTTTCTTGCCCTGAACATTGTCCACGTGAAATCTATTCCACCCTTTATGCGTGTTGTTGGAATTACCGAGAAGGCGAACGGAGTAACTTTCAAAATCTTGAAAAAAGACTGTTAGAGACATTACCGATCGAAGTAAGAGCCATAACCAATTCAACAACAGGAACTCTTACAGATGGGTTACATTTCATTGCTGGAGACATTGTCACTGTTTTCAACTTGGACAGTGCTGATGGGATATGGAAGGGCCAAAACAGACGAACAGGACAAGTGGGCTTCATCCTCTCGCAAAATGTGGATATACACGCGGGGATCATATCAGGTGCAGCGAATGTTGGTCAGGATGAAGGTGTAAGACGCTGCTCTCTGAATCGGCTTTCTGTACCGGCTGAAGGATTTGTCAACAAACTTTGGACGTCATCTCAATGGCTAACAGAAACTGATTCAACAGGAAGCGAATTAAGAAGTACCACACCTAAAGATGTCTCTTTTGAATGCACCAATAGTTTCGGATCAGGATATGGTGGTGGAATGTCAAGTATAGAAGGTGGATACTGTGAAGACTGTTTATCACAAAGTAGCATTGATTCAGGATGTCTTTGTCGGTGCAGTACGTACAGTTCAGACTCTTCAACACACCGTTGTAACACGGCCGATCTTAATGCTCAGACGTCTACAATTGGTATTCCACAGCTGACCAAACCGATCACTATTCCAGGTAGAGCACGTCATCGCAGTAGAGGATATAATATCACCAACAGAGGACGATGTTCATCTTGTAGCTCATCCAATCGACATTCCGTTTTCTCAGATACTCTTGACCGCGATGAATCACCATCATTCTCGTCAAATTCACCAGTATGCTTGGACCTCGTTAATAAAACAATGTCCTCCTTGAAACTACAAGATAGTGGTATTTCAAATAAATCTAAACTGTCAACAAGTGAAGGTACAAAATCATCTAAAACGATGACGGAACGCCGGCGCTCGTTACCAGATCTTGCCAATCCACGTAAACGCAGCCTATTACGTCGTTCGTTACGTTTCCGCAAGAAGAAAGAGGAACTTACCTCTAAAGAATTAACAGTCAGTGCTCCTATCCCTAACACCGAAAGCTCTGCTAAGTTCTACATCCCTGGACAAGACGCAATGATCCCTGGCGGTACAGCCAACTCCTCGTTAGAATCAAAACTCCAGTGTAACCTTTACGATTTAGTTCCAATTCGTGATCATTCAAAGACAAAAGTATTGGAAGATTTAGCGGTTGTTGATAACAGAGATCTTGAATCGAGATATGATACACCTCCGCCTCCAAAAGCCATTAATTCCAATACCCATAATCTGCTCGGTAATGGGCCAACAAATGTAGAGGACTCGCAAATATATGAAAATGTTCAAGAGCTGAAAAGTCCATCACCTGTCGCCCCACCACGTCGAAAAAAACGAAATTCTATCGCCAGTAAACGGTACAGTATGATTGAACTTGGTTCAGACTCTTCCAAATATACCGACATGTCTTCCATTGTCAACGTTTCACCAAATGCAAGACAATGCATCATATTGGATCAGAAAAACTATGATATATTGAAGTCATTGTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q07912	Activated CDC42 kinase 1 OS=Homo sapiens OX=9606 GN=TNK2 PE=1 SV=3
O54967	Activated CDC42 kinase 1 OS=Mus musculus OX=10090 GN=Tnk2 PE=1 SV=2
Q5U2X5	Activated CDC42 kinase 1 OS=Rattus norvegicus OX=10116 GN=Tnk2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005550 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050198 all species →	Family	Non-receptor tyrosine kinases involved in cell signaling	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24418 all species →	TYROSINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_066915607.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.