Gene detail

Detailed information of XP_066915877.1 in Clytia hemisphaerica

Genomic Location: NW_027103648.1:876637...889269
NR annotation: XP_047130547.1, homeobox protein PKNOX2-like isoform X2 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
O70477	Homeobox protein PKNOX1 OS=Mus musculus OX=10090 GN=Pknox1 PE=1 SV=3
Q2HJ84	Homeobox protein PKNOX1 OS=Bos taurus OX=9913 GN=PKNOX1 PE=2 SV=1
P55347	Homeobox protein PKNOX1 OS=Homo sapiens OX=9606 GN=PKNOX1 PE=1 SV=3

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16493	Meis_PKNOX_N	N-terminal of Homeobox Meis and PKNOX1	Family	Interproscan
PF05920	Homeobox_KN	Homeobox KN domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR032453	Domain	Homeobox protein PKNOX/Meis, N-terminal	Interproscan
IPR050224	Family	Three Amino acid Loop Extension (TALE) homeobox	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR008422	Domain	Homeobox KN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24891	PKNOX; homeobox protein PKNOX	-	Transcription factors	ko03000	deepkoala