Detailed information of XP_066916319.1 in Clytia hemisphaerica

Genomic Location: NW_027103674.1:1860989...1882923
NR annotation: XP_008477646.3, nuclear factor 1 [Diaphorina citri]
Species Clytia hemisphaerica · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P14057Nuclear factor 1 (Fragment) OS=Sus scrofa OX=9823 GN=NFI PE=1 SV=1
P70255Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic PE=1 SV=1
P21999Nuclear factor 1 C-type OS=Sus scrofa OX=9823 GN=NFIC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002791 (this species only)
Transcription factor familyMH1 · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10524
all species →
NfI_DNAbd_pre-NNuclear factor I protein pre-N-terminusFamilyInterproscan
PF03165
all species →
MH1MH1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019548
all species →
DomainCTF transcription factor/nuclear factor 1, N-terminalInterproscan
IPR020604
all species →
DomainCTF transcription factor/nuclear factor 1, DNA-binding domainInterproscan
IPR000647
all species →
FamilyCTF transcription factor/nuclear factor 1Interproscan
IPR036578
all species →
Homologous_superfamilySMAD MH1 domain superfamilyInterproscan
IPR013019
all species →
DomainMAD homology, MH1Interproscan
IPR003619
all species →
DomainMAD homology 1, Dwarfin-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11492
all species →
NUCLEAR FACTOR IInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →
Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978
all species →
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005667
all species →
Cellular Componenttranscription regulator complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_066916319.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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