Gene detail

Detailed information of XP_066917753.1 in Clytia hemisphaerica

Genomic Location: NW_027103734.1:1285216...1287004
NR annotation: XP_047122808.1, probable splicing factor, arginine/serine-rich 7 isoform X9 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q05519	Serine/arginine-rich splicing factor 11 OS=Homo sapiens OX=9606 GN=SRSF11 PE=1 SV=1
Q9FGE6	Polyadenylate-binding protein-interacting protein 13 OS=Arabidopsis thaliana OX=3702 GN=CID13 PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13165	SREK1, SFRS12; splicing regulatory glutamine/lysine-rich protein 1	-	Spliceosome	ko03041	deepkoala