Gene detail

Detailed information of XP_066919912.1 in Clytia hemisphaerica

Genomic Location: NW_027103836.1:1920074...1976215
NR annotation: XP_012554003.1, spermatogenesis-defective protein 39 homolog isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5TYV4	Spermatogenesis-defective protein 39 homolog OS=Danio rerio OX=7955 GN=vipas39 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04840	Vps16_C	Vps16, C-terminal region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038132	Homologous_superfamily	Vps16, C-terminal domain superfamily	Interproscan
IPR040057	Family	Spermatogenesis-defective protein 39	Interproscan
IPR006925	Domain	Vps16, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13364	DEFECTIVE SPERMATOGENESIS PROTEIN 39	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0007034	Biological Process	vacuolar transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23287	VIPAS39, VPS16B; VPS33B-interacting protein in polarity and apical restriction	-	Membrane trafficking	ko04131	deepkoala