Gene detail

Detailed information of XP_066920059.1 in Clytia hemisphaerica

Genomic Location: NW_027103839.1:768831...781795
NR annotation: XP_012561105.1, GTPase-activating protein [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_066920059.1

ATGCCTGTCTTTGCATTCGAATCAGCCATGGCGTGCTTATCAGCCGAAATTACTGCCAACAATCAATTATTCATCCAAGAAGACCAAAAGAAAGCATGGGTGCTGAATGAAGAACTGTATGACCAACTGCGACGTCAACTGCAAGAGCTCAAAGTGGAAATCTGCAAACAGTGTAAAAAGAATTTCGAACTCGAAAAAGAAGTTAAATTTTTCGATCAAAGAATCGCACTTTTGATCAACCATAAAATAAGTGTAGAGGAATTTCCAGACAATATCTCATACGGAGAACACAGACTCGATACATTGAAAGATGATATTCAAAAACAGTGTTTTGGAAACTTGTTCTTCTTGCTACAAACGGAGCCAAAATACATCGCTAAATTGACGCGTAGTGTGGACACGACAGAAATTGATGAGTTGTTACAAATCGTCATGTTTTCTTTGTATGGCAACCAATACGGTGAACGAGAAGAACACTTGCTCCTCAAAATGTTCGAGTTGGCATTGAACATGGAATTCGACGAGACTGATGAATTCGGAAGCTTGATGAGACAAAACACAGCAATCTCAAGAATGATGACCACTTATACAAGACGTGGGCCTGGACAAGAGTATTTAAAAGACACACTACAGGAACTTGTGGAGCAAACGAACTTAACTGGTCTCAGTGAAGATCTCAATCTTGAAGTGAACCCGGTGAAGGTCTATTGCGCTCTACACAGTGTCGTCGATGACGAGAGGAATAACGTCACAATGGAGAAAGCATTGAAAGACAAAGATGTTAAGGCCACCATCAACGCTCGCCTAGTCAAACTGGAAAATATCACCAAATATTTCTTCGATGCTATTATCCAATCGTTGAACAGTGTACCTTATGGCATTCGGTGGTTGTGCAAAGCTATCTACCAACTCTGCCAGGAGAAATTTCCTCACGTTTCAATTGAAAATATTACAGGGCTGATTGGCGGGTTCTTCTTACTACGTTTCATCAATCCCGCGATTGTTTTCCCGCATAATTACATGCTTCTGAATTCTCAACCTCGATCACAAATGCGAAGAAACTTTGTGTTAATCGCAAAACTCTTACAAGCTATCAGCAACAAAGGAGCTTCACAAATTCTGAAAGAAGTCTACATGAAACCTTTGGAAGCTTTTGTTGAATCGAGACAACAAATTTTGCAAGATTTTCTCATGAAGTTGTGCAATGTGGACGACTTCCATTCCAACCTCGAGATGGAGCAGTATCTATCACTACCGAAAGATATGAACATTCGAATCACGTTAAAAGAGATGTATCGCCTTCACGATCTCCTCTGCAAATACCAAGATTTCCTGACGGTCGAAGATAACGAAAAATTGACTGTTCTGCTTCTCGAACTTGGTGATCCAAGCGCCAAATATCGTGACCAACAGGTTGAGAATGTGAGTGTTGACATCAATTTGTTGAGCCGTTGGGATGTCTCTTCCAACCTCAAGAATGACATGATCAATGATTATGAACGCACTTCCGAACGTGGTATCAAAGCTTTAAGGAAACGTTGTCAAAATTTATTGACAAGGCTACTGACTACGGCTCCATACTTAATGCAAGAGTTGACGTTGAAAAATGTCTTTGCGCATGCGTACAAGACAGGTGATGACGAGATCGAACGTATTACACAACTCGTGAAATCACATCTCGATTCGCTCAAAGAATCTGACCCCAACTACAAAGAAGAAGAATTTTACGTGCACGTCAAAGATAGTGTTTCGAAACAAGAAATCCATTATGATAAAATGAGCAAAGAACTGAAAAGTTTGAAGAACGTTCAAGAGACACTCATCTGGCACGGAGAGTTCTTGAGTCAACAGCTAGATGCATACAAAGAATATTTACAGGATGCAAGAAATAAGGCAGCTGTCAGAGAAGGCAGAGCATCTCCAGGAAAAATGACCAAACAAAATTCAGGACCATACAAATTCTCATACACTGCTCTTGAAAAAGAGGGAGTCATCTTTGAATGCAAATCCATTAGCTATAAGAAAAAACAAAATATTGCATTTACAGTCTTCTGCAAGGAACCTGGAATCTACACTATTCAATTGCATTATAAAATACCTCTTCCTGGCCAACAGACCCTAATGGAGTTGGATTTGCACCTGGAAGATTTGTTGAACCTCCAACATTTTGATGACCCTGTTTACAACATCAATGAATACGTTGTACTGGATGTCCGACGCACCTTATCTTTCCTGCATAAATATTTCGGGCCCAAGAAATTATGA

Transcript

Protein

Uniprot

Uniprot term	Description
P33277	GTPase-activating protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gap1 PE=4 SV=1
Q54K32	Ras GTPase-activating-like protein rgaA OS=Dictyostelium discoideum OX=44689 GN=rgaA PE=1 SV=1
O00899	Ras GTPase-activating-like protein gapA OS=Dictyostelium discoideum OX=44689 GN=gapA PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03836	RasGAP_C	RasGAP C-terminus	Family	Interproscan
PF00616	RasGAP	GTPase-activator protein for Ras-like GTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001936	Domain	Ras GTPase-activating domain	Interproscan
IPR000593	Domain	RasGAP protein, C-terminal	Interproscan
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14149	RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0043087	Biological Process	regulation of GTPase activity	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005938	Cellular Component	cell cortex	Interproscan
GO:0046580	Biological Process	negative regulation of Ras protein signal transduction	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan