Detailed information of XP_066920652.1 in Clytia hemisphaerica

Genomic Location: NW_027103852.1:574411...593348
NR annotation: XP_002154561.4, nibrin [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5RCV3Nibrin OS=Pongo abelii OX=9601 GN=NBN PE=2 SV=2
Q9R207Nibrin OS=Mus musculus OX=10090 GN=Nbn PE=1 SV=1
Q5I2W8Nibrin OS=Danio rerio OX=7955 GN=nbn PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16508NIBRIN_BRCT_IISecond BRCT domain on Nijmegen syndrome breakage proteinDomainInterproscan
PF16770RTT107_BRCT_5Regulator of Ty1 transposition protein 107 BRCT domainDomainInterproscan
PF00498FHAFHA domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043014Homologous_superfamilyNibrin, second BRCT domain superfamilyInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR032429DomainNibrin, second BRCT domainInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR001357DomainBRCT domainInterproscan
IPR040227FamilyNibrin-relatedInterproscan
IPR000253DomainForkhead-associated (FHA) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12162NIBRIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0007095Biological Processmitotic G2 DNA damage checkpoint signalingInterproscan
GO:0030870Cellular ComponentMre11 complexInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10867NBN, NBS1; nibrin-DNA repair and recombination proteinsko03400deepkoala

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