Gene detail

Detailed information of XP_066920851.1 in Clytia hemisphaerica

Genomic Location: NW_027103855.1:1140147...1218436
NR annotation: XP_047126593.1, cytoplasmic dynein 2 heavy chain 1 [Hydra vulgaris]
Species Clytia hemisphaerica · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_066920851.1

ATGAGTCAAGATCCAAGGAAAGAGTTTGTCCTTGCGACAATTGCTAACTATTTTGGTATAAGCTCAAATGACAAGACCATTACAGAGCATCAAAGATCAAAACAAATCAACAGCTTTTTGGATGATGGAAACCAATCTATCTTAGTTAGCATTCTACAAAATGGAAAACATGTCCAATTATACAATGACCTTCAAAACAATAGTCCAGATGAGCAATGTATTATCTTTTTCAAACTCAAACCCGAAGCAGTGACGCCTGAAAGTATTCATCATAATGTCCTTGTATCATCTATGTTTCAATCACCAGCAAGTACACTTTATCACACTATCAAAAAGATTTTTGGACCCTTGATACTCAATGGAGACATATCAAATAAAAGTGTTGACCCTAAGTTACAAAACTTACTAAGTGAGTTGGAAGATGGTCTAGGAAGCTATCTTAGAAAGACTGGTGATTTTCTTGGCGGTAATAACAAGAGCAAGGAACAAAATTTTTCATCCATTTTGACACCAGCTGATGAATTTCAGTTTTGGTCAGATGCAGCCAATCATGGAGATGACCAAGCTAAAACATTTGATGAAATCTTCAAGAAATCCAACTTCAGCAAAGATTTCGCAAACCTTGATCCTTTGGAGCTGGCTGATGTCTTGGAAACTGTCGATATATCAATGGACATTCTTGATGAAATCTGGAAACAAGATGACCACAAAGAATATCCTCAAAAGCGAATGATTCATATCTTTGACATCTTTGGTGGTAGCATTGGTCGATATCTCCAAAAAAAGTTTTCAGATGTTGACATTTGGAAATTGAAGTTCAGTGTTGTTAAAGAGAGACTTCAATATTCTATTCAGATTTGTGAGAAATGGCGTGATGTTTGTAAAAATTTGACTGAGAAGTTTTGGAAGACCTATCACGCACATCCGTGGAAAGATGGGAATTACATGCCAGATAATTTGATGAAACTTTGCGAACGTTTCAAAGAAATTCTTCAGATCAGGGTTATCCACGAGCAACACAATCAATTACTTTCATCTGGTGAACGGCAATATCTCAGCAACAGTCAAGCATTCCAACCATTTGCAGGGCTGAATCCAGTCCAGTATAATCCCTTTACTGTACCATTGTGGAATGCAGCAGTGGCACAATACAATAAGGATATAGAACCCACTGAAGAACGTATTGCCACTAAGCTCAGAGAAAAGCTATCAGTCAGTAAAGCTAAATCGTTCCAGCTGTTACGAGAATTCCAAAGATACAAGGAGCTCATTAATCGACCAAGTATCAAAAAGGCATTGACTGCTGAGAGGGAAACACTTATTGGTCAGCTTTATGAATATGTGAAGAGTTTGAAATCAGACTTTCAATCTAAATCAACGTTTGCCAAAGGAGAAGGACCACCCAAAGGACATAACATGCCTGAAATTATCAATTATATCATGTGGGGAAGACAATTGGAAGCAAGGGTCAAGGAGCTGTTAGTTTCTTCGGAATCGTTGTTGTCTGATACTGGTTCCTTTGATAAATTCAAGAAATTTTGTTTGTCATTGATCAATGAAATTGCTGTCTACATCAAAGATAATTATGAAAATTGGATTAAAGAGACCACTGAAAATATTGACAACGAGGCTTTATGTTTGAAAACAACGGGTCGTTTGATGGAGCTTAACCATTCTGACGGTAAACTTGAAGTTCAATATGATGAAAACTTGGTCAAACTTATTCGTGAAGTTCGTCAGTTTCAAGGTCTTGGTTTTAATGTGCCATCAAAGATACAATCAACATCAACCAAAGCTATGAAGTTTTATCAACAAGCTATCATATTGAAACAGGTTGCTCATTTCTACAACACTATTGACAAACAGATGGTGGCATGCCAACAATCTATCATGTTGGATACTGCACTAGCTTTTGAAAAATTGGTCAAAAATCCGAACTCTGGTTCAAAGAGTAAAGGATCAAATACTCAAGTCACATGGGACAACCCAAAAGAAGTTGAACAATACATCACAAAACTTCAAATTGTTGCCGAGAAATTGACCACTGATAATCGGAAGCTGAGAAAATGTCACAATGTCATGATCGAGAAGATTGTACAATTGATGGGCATTGACTTACTGAGACATCAAACAAGATGGAAAGATGGTCTGATGGAAATGAGACAAACTATCAATAACTTGGTCGAACAGGGTTTCAAATTGAGTAACATGAAACCTTGGACGTTACACCTCGATCACCAACTCTATAAAGCCTTGGAGCATCAATACCAATTGGGATTAGAAGCTTTGAATGAACATTTACCAGAAATCAAAGTTGAATTGGTCTTTAGACAACAGCAACTTCAGTTTCGTCCACCATTTGAAGAAATCAGATCCAAATATTATCGTGAAATCAAAAAGTTCATCTCCATCCCAAAGAATTTCAAAGGATTAGCTGACAACCAAGCCATGTTTCAAAACATTATTCAAAACAACTCACATCTTTTTCAAACAGTATACGAAAAAGCTGAATCACTTTTCGGACGTTTAGCAGCTGTCAGAACACAGTTTGAGGATTGGGTAGTGTTGGGATGTGTGGATGTGGACCAGCTTGTGGAAGAGAAATTACATTCAGTTGGGGATTGGGAATTGAACATCAAAATGATCAAAGTCAAAGGAAAGGAAGCTGAAAAACTACCTCTATCTTGTAAAATCGATTGCATCACAGTATCCACCTCTCCAGTCAAATCAAGTATCGATGATTTATTGGCAAAGCTGTTCGACACCCTCTTAATCTCCTTAAGAAGCTCTGTGGTGAATGAGTACAATGCTATTGATAGTTTTTCCACAAAGAGTATGGAGGACCTGAACCAAGTGCCACAGACTATTGAAGAAATGGGTGATGTCAATGAGAAATATCAGAAAATAATGGCTGAAAAACCACAGCATAAAGAAGAGCTGACAAGAGCACAACAGAAGAACAAGTTACTTGCACAAACATCAGGGAGCGGTGTGGAAAAGATCGTGGAATTATCGCAAAAGTGGGAGAAGCTTGAAATGTTATTGGAAGCTCATGAAATGATGGTCAAAGGACAGAGAGAAACAATGAAGAAGGAGCTAGCCAATCGTTCAGAAGCTTTCCAGCAAGAACTGGAACGGTTCGCCGCGCGTTGGCACCAATTGAAACCAGCCAACATTGATGCTGATGCGGATAAGAAGGTCTGCATGCAGGCTATCAGTAACATCAAAGAGCGACGCGTCGAATTTAATGATATCGTTGAAAGAACGAAGAAATTACAGGTTGATTGCTCTCACTTTGAAATGGAAAGTCACGAATTCCCTTTGATTGAAGAATTAGAAACAGACATTTCAACGTTTGAAAACATGTGGAAGTTGTACGAAGAATTCAATACTGATTTAGAAATGCTGAGTCAACAAGATTGGATTTCGTTCAGATCACAGACTGGTAAATTCGATGACTTGTTGGGAAGTTGGGTAGACATTCTTAAGAAAACTGAACCCAATGTCATGACTTTGAAAATACAGAAAGATGTTGATTCATACAAGAATTTGATGCCAGTATTGAAATACGTACGCGGTGAACCATTGTCTACGGATCACTGGATGGAACTCTTTCGCATGGTCAAAATGCCCAAAGGAACTACTCTTGAGAAATTGTTATTCGCTGACGTCTTGAATGCGTGTGATGAAATAATTGCACATAGAGATGACTTAAAGGAATTAAATAACCGTGCTCAAGGAGAGGTGACCATACGAGAAGCTTTGAAAGAGTTGGACCTATGGGGAGCTGGTGCAGTATTTGTGTTGACAAGTTATACTGATACCAACAAAAAAGAATTACAATTACCCAAAGATTGGCGTGACCTCTTTAACCAGATTGGGGACCACCAATGTCTTTTACAATCGCTGAAAGATTCACCCTACTATCAAGGATTCATTGACAAAGCTACCATTTGGGAAACTCGGCTCGCCGATTTGGACGAGTACCTTCACAACCTCAATCAGATTCAAAGGAAGTGGGTTTATCTGGAACCCATTTTTGGTCGCGGTGCGTTACCAAGGGAACAAGATCGATTCAAAAGGGTGGATGACGATTTCAGGTCGATCATGTTTGACATCGAGAGAGACAATAGATTGGTGTCCATTGTTTCAAGACCTGGTATTCGAAATCTCTTGGTTACAATGCTGGATCAATTGCAACGATGTCAGAAATCACTCAACGAGTTTTTGGAGGAAAAACGTTCGTTGTTTCCACGTTTCTATTTCATTGGTGATGAAGATTTATTGGAGATTCTTGGACAAGCCACTAATCCGAAAGTCATTCAAACACATCTCAAGAAACTCTTCGCTGGCATACACAATGTGGATTTTGATGAACGTTGCCAACACATTATTGCCATGAAATCATTGGATGGTGAAGTGGTCCCTTTAAATAATCCAATAACCATTACAGATGAGGTTGAGGTTTGGTTAGCTGATCTTGCCAAAGAAATGAAAGGAACATTGAAGAAACTGTTGACTGAATGTATTTCCGCAAGTAAATCTGGAAATATCGACCCTGGCAAATTCCCATCCCAAATCTTATGTTTGGCTGAATACGTTTTATTCACTGAGCGATGCGAGAATGCTATCGACACTGGCAAACTTCATTCCTTCAAGAAAGAATTAGAATCTCAATTGGAAGGTTATACATCAGCTGAAATCAGTGGTGAAGGCGTCGAAGCCAAAGTGTTGGAATTAAAATTGAAAGCATTAATTTTGGATCTGATTCATTTTATTGATGTGATTGACCAATTACAGAAGGAGAATATCAGGAGCACCAATGATTGGATATGGCAGAAACAGTTAAGATTCAAAATGAGCAAAAAAGGTGAATGTTACATGACGATGGTTGACGCTGATTTCGAATACACATACGAATACCAAGGAAACGCTGCCAAACTTGTACACACTCCACTCACAGATAAATGTTATCTGACCTTGACTCAAGGAATGAAGATGGGACTCGGTGGGAACCCTTACGGACCCGCTGGAACGGGGAAAACTGAAAGTATTAAAGCCCTGGGTGGCCTCTTTGGTCGACAAGTATTGGTATTCAATTGTGATGAGGGTATTGATGTTAAATCAATGGGTCGTATTTTCATTGGATTGGTCAAATGTGGTGCATGGGGTTGTTTTGATGAGTTCAACCGTCTTGAAGAAGCTGTCCTCTCTGCTGTCTCTATGCAAATTCAAAGCATCCAAGCGGCAATCAAGAATAAACATTCGAATATTGAATTGCTTGGTCGAAATATTGAATTGGATACAAATTCCGGTATTTTCATAACCTTGAATCCGGCCGGTAAAGGATACGGAGGTCGTCAAAAGCTGCCGGATAACTTGAAACAGTTATTCAGACCTGTTGTCATGTCCAAACCAAACAACGAGTTGATTGCTGAAGTTCTTTTATTCTCAGAAGGTTTCAAAGATGGTAAAAGTTTGGGAAGAAAATTGGTGGCTATTTTCAACCTCTCAAAAGAGCTCTTATCGTTCCAACAACATTACGATTGGGGTTTGCGTGCGTTGAAAACTATTTTGAAAGGATGTGGTAATCTTTTGCAGCACACCAAATCCATAATGAAAGATTCCGGTAAAAAAGTCGACATTGAAAAAGAAAAGAACTTGGTAGTTCAAGCCCTCCGTTTGAACACATTATCCAAACTTACCTTCTCTGATTGTAAGCGTTTCGATGCTCTAATACAAGACGTCTTCCCTGGCATCAATTTCCAAGACGTCGAATACACAACGTTACGTGAAGCACTTCGTGACGCAATGAAAGAACTCGGTCTTATCGAGAGCAAAGTGCAGATCAAAAAAGCTTTGGAGTTGTATGAACAAATGCGCCAACGGATGGGCGTGGTCGTGGTTGGACCAAGTGGATCCGGTAAAACATGTTTGTGGAAAGTGTTGATGGCTGCTATGGCAAAGATTGGACAAACAGTCATCAAATACACCATGAATCCTAAAGCAATGCCTCGTACACAGCTTCTTGGTCACATCGACATGGACACACGAGAATGGTCAGACGGTGTCTTAACAAACGCTGCAAGACAAGTAGTACGTGAACCTTTAGAAGTGCAATCATGGATTATCTGTGATGGTGACATTGATCCTGAATGGATTGAATCGTTGAATTCAGTCTTAGATGATAACCGACTGCTCACAATGCCGTCTGGCGAGCGTATTCAGTTTGGACCTAATGTCAACTTTTTATTTGAGACGCATGATTTGAGTTCAGCATCTCCAGCTACTATTTCAAGAATGGGTATGATTTTCTTAAGCAACGAAGATACAGACGTTCAAGCCATTGTCAATTCATGGATCACACGTGAAGCCAAGGATAACCAAATGCTAGCTGGTTGGATCAACGATTATTTCATGAAAGCTTTACAATACACTTTGAAGCAAGAAGCGTTTGTTGTCGATACCACCCTGGTTGGAGCTGTCCTCTCTGGACTTTCGCATATGAAAGGTGTAACAGCTAAAGGTGAATTCGCATGCGCACTAATGAAAGGTCTGGGCGCTAATTTGCAAGAAGAATCGAGGATATCTTTAACAAAAGAGATTTTCAAATGGTGTGGAGAATCGCTACCAGACCCCTCAAATCCATTGGATACTTATTACGATAAACAACGTGGCCGATTGGTCACTTTCCAACTCGAGGTACCCGACAATTTACAAACAGATGATTTCTCTACAACTAAATTACCGGTCATTTTGACACCTGACGTTAAACGTAATCTCGATGCTTTCTCCAGATGGTTAGAAACAGATGAGAATCGACAACCGTTCATTCTGGCTGGTCCTGAAGGCTGTGGTAAAGAATTACTATTGAATCACACGTTCAGCAAATTGCGATCAGTTCAAGTCGCCACTATTCATTGCAATGCCCAGACCTCACCTGTTCACGTCTTACAAAAACTCGCACAGACATGTATGACAATTAGTACAAACACAGGGCGTGTATACCGCCCTAAAGATTGTGAACGCCTTGTTTTGTACTTGAAAGATATCAATCTACCGAAACCTGATAAATGGGGAACCAGCCAATTGGTCGAATTCCTACAGCAAGTTATCACATACAACGGTTTTTACGATTTCAATTTGGAATGGGTTGGTTTGGATGGTGTGCAGATTGTGGCATCAATGAATTCCACAAGTTCAGTGGGTCGACATCAACTCAGCTCACGATTCACGTCAATCGTTCGAATCGTATCCATCGGCTATCCGACAAAATCCCAACTGGAGACAATTTACACGGAATATTTGAAAGGTTTACTGAAAGAAGGTTATCAAACACATTCAATATGGGGCAACGAAAAGAATTTGAAACAATTAGCAAAATCGACCGTACAAATATATGATTTTGTCAAGAGTAAGTTCACGGTTGACGATTATCCGCACTACATTTTTACACCGCGTGATGTGACAATGTGGATACTAGCTCTACTTAGGTATGACATTGCGGATTCTTCTGGAGATTCTGCCGAAGCCTTGCTCAAAGTATGGGCGTACCACGCCAAGAAATTATTCGGTGACCGATTAGTTGGAAAAGAAAGCCGAGAAAAATTCGATTCAATGTTGATATCGACCGCGCGTAATGACTGGTCTGTCAGTTTGGACGATTTTGGTAGTTCGTATTATGTGACATGGGGAAGCACTGGTGGTATAGCAAAGACAGGTAATGTGATGGGATCCTTTGGACGTCCACTTGGCTTACTGTCCAAAGATGATTTCAAACAGATTGTATCCAAAGGCTTGACTGCATATGCTCGAGATACCAAAGAGATAGATTACCTGATATTCAACGAAGTTCTTGATAACGTTTCGCGTATGGATCTTGTCCTAACGCAACCTGGCGGTTCGCTTGTGCTCGCTGGTCGTTCAGGTATTGGTAGACGCACTGCTGCAATGCTAGTGGCTCACATGCATCAGGTGAATGTTGTCACACCGAAGGTTGGACGAGGATATGGCACCAAACAGTTTAAAGCTGATCTGAAAGTTGCGATGCAAAGTGCTGGAATTGACGGTGAACAAGTCATTCTCCTGATCGAAGATCATCAACTCGTTGAAACTGAATTTTTAGAACTGATCAACAGTCTCTTATGTTCGGGCGACGTTCCTGGTCTATACACGTCCGAAGAATTGGATCCACTTCTAAATCCGTTGCGCGATCAAGCGTCACAAGACGGCTTCCGTGGTCCGATGCATGCTTATTTTGCACGACGTGTCATGTGTAATTTGCATGTTATCTTGGTGATGGATAGCACGGCTCCATCTTTTGTGGTGAACTGTGAAGCGAATCCAGCTCTGTATAAATGCTGCTCATTCCAGTGGATGGATGGCTGGTCAAAGAGTAGCATGCTGAAAATTCCCAAGATGCTTTTAAACAAGAGGAACAAAGCTAACGAAAAGGAATCCAACAATACCATCAAATTTGCCGTCACCGACAAGCTCTGTGAACATTTTTACAGCATACATCAAACCTGCCAAAAGATTGGTGCTACGCCAAGACTGTACTTGAGCTTCTTACAGAACTATGTAAACGTGTATACTGAGAAGCGAAGTGGTATCGAGAAAAGGAGAGGCCATCTTCAGGGAGGTGTATCGAAACTAAACGAAGCGACCGCGCTAGTAGATGACCTGAAGAAGAGTGCGGCTGAACAAAGTAAATTATTGACTGAGAAACAGGCCGAAGCGGATGCCGCGTTGAAAGGAATCACTCAAAGCATGCAGGATGCTGGTAACCAAAAAATTGAGATGGAGAAATTGAAAGAAAAACAGGGTGTCGAAGCAGAGAAACTTGCCAAGCGTAAGAAAATGATTGAAGCTGAATTAAGCGAGATCGGGCCACTCCTTCACGAAGCGCAAAAAGCTGTGGGCAACATCAAGGGAGAATCATTGAACGAGATAAGAGCATTAAGAATGCCTCCTGAAGTGGTTCGAGATATTTTGGAAGGAGTGCTAAGACTTATGGGTATTATGGATGCATCATGGGTCAGCATGAAAGGATTTTTGGGCAAACGTGGAGTGAAAGATGAGATTTGTATGTTCGACGCGCGAAGTATATCACACGATGTCCGTGAAAGTGTGGAAGAACTTTTGAAATCAAAAGCAAGCTCCTTTGATCCAAAGAACGCCAGACGTGCGAGTGTGGCTGCGGCTCCGCTAGCGGCGTGGTGTAAAGCTAACGTTCAATATTCCAAAGTCATTGAGAAGATTCAACCGTTAGAAAAAGAACAAAACGACCTTCAAAAGGGTATTGACAAGTCACAATCGAAGTTGGACAAATTAGGGAAAGCGCTAGCAACGGTGGACAAAAAAGTTGCTGACATGAAAGATAAGTTTGAGAAGCGTACTCAGGAAGCAGCCAAATTGAAAGTGGATGTTGAAAAAGCACAGGAAACGATCACTGCTGCTGAAACACTGGTTGGAAAATTGCAAGGAGAATTCAAACGATGGTCTGCTCAGGTCAAAGAGCTAACAGACATTACAGAACAGCTACCCTCAAGAGCACAACTAGCCTCTGCTTTCATCACATACATGGGTTCACAGCCTGAAGACATTCGACGAAAATATTTGAAGAAATTCTGTCAGTTGGTGAACATTGAGGAATTTGATTTCAAAAAGTTCTTGAGTACTGAGAGTGAACAACTTGTATGGAAAGGCGAAGGATTACCTTCAGATATGCTGTCCATGGAAAATGCAATGGTTATCTTAAAAGATTCAAGTTGTCCATTTTTGGTTGATCCTTCACAGCAAGCTACTGAATGGTTAAAGAAACATTTGAAAGAACAACGGCTCGAAGTCATTAACCAACAGGATTCAAACTTTGTGACGGCATTAGAGTTGGCTGTACGTTTCGGGAAGACACTCATCATTCAAGAGGTGGACGGGGTTGAACCTATCTTGTACCCGGTCCTGCGGAAAGATTTCACCAGCCAAGGACCCCGTTTCGTTGTACAAATTGGTGAAAAAGGAGTGGACTATAATGAAAATTTCAGGATATTCTTGACCACGCGAAATCCGAATCCAGAATTGCCACCAGATGTTTCCTCAGTCGTCAATGAAGTCAATTTCACAACTACCAGAGCTGGACTGACCGGACAGCTTCTTGCATTGACGTTACAAATGGAAAAACCAGAATTGGAGATCAAGAAGACGGAGTTGCTTCAGAAAGAGGAAGATTTGAAAATACAGATTGCCGAACTTGAAGAATCCTTACTTGAGTCTTTGGCGAATGCCGAAGGTAATATCTTGGAGAACAAGGAACTATTAGATTCGTTGAACAAGACGAAGTCAAGTAGCAGCACCATTGCTCAATCCTTGAAAGATGCCCACGAAGTTCAAGCCTCTCTTGATAAGGAGAGAGATGCATACTTACCGTTAGCCGAACATGGTAGTGCAATGTATTTTGTCATCTGTGACTTGGCCAAAATCAATAACATGTATCGATTCAGTTTGTCATCTTTCCTTCAACTCTTCCGAAGGGCACTGGAATCCGTTAAAGATAAAGGAGAAGGAAGCGCTCGTATTAAAAGACTCGAGGGTGCAACTCAAGCACTTGTTTATGAGACTGTTTGTCGATCTCTATTTAAGGACGACCGTTTGATGTTTGCACTTCACTTGGTTCACGGTATCTATCCGAAGAAATTCGAAAAACAGGAATGGGACTTCTTCACTGGTATGATTGTCAGTGCTGTCTTGCAAAACAAGGATTCGAGTTTAAGTTCATCTTTACCACAATGGGTTGACGAAGAACGAGTGGCTGATGTCTCCAATTTTAAGAGTACATTTTCATCCTTATTCTCATCGTTGGACCTTGGCAACCAACAGCTCTGGTCAACCTTCGGCAAAAGCTCCAAATGTGAACAAGAATTCCCATCATCTCTCAACAAAGTTACTCCATTCCAGCAGTTACTGGTTGTACAAATGTTACGACCTGATCGTCTTCAAAGTGCAATGAATCAATTTGCTGCTAAATCATTAGAACTGAAAGCTTTAGCAACTTCCTCGGTCAATTTGAAGAGGTTGATGAAAGAAACATCAAGCAAAGAACCTATCCTTATCATTGTTTCTCCTGGTTCTGATCCCTCACAGGAATTGCAAGAATTGGCCACTCAAACAGTCGGTGCTGATCGCTATCACCAAGTTGCCATGGGTCAAGGTCAATCAGAGATTGCCATGAAATTATTATCTGATTGTTCGAAGAATGGTGATTGGTTGTGTTTGAAAAATCTTCATCTCGTCACTTCATGGCTTCCAAAACTTGAAAAGGTCTTAAATGGATTGCAACCTCACGAAGGTTTCAGGCTATGGCTTACAGCCGAAACACACCCCAAGTTCCCTACCATCTTACTCCAATCCAGTTTGAAAGTCACTCTTGAAGCACCTCCAGGAATCAAAAAAAATATGCAAAGGTCTTACGATAGTTGGTCTGCCAAATTTGTTCAAGAAGGGAATGGATCGAGTAGAGCACAGACTCTTTTTGCATTGGCATGGTTGCACGCTTTAGTTGAAGAACGAAGAAACTTCATTCCTCAGGGCTGGACGAAATCGTACGAATTCTCGATGGCCGACTTGCGTGCAGGAGCTGACATCATTGACCGCTTATACAAAATGGCTGGTTCAGGGAACATCAAATGGGATTTCGTGCACGGTCTATTTGAGAATGCAATTTATGGTGGTCGTGTAGACAACGTCTTTGATGTTCGAGTATTGACATCCTATCTACAGAAATATTTCTCGGAAACACTAAGTAATGGGCGTGGCAAAGGAAATTTGTTTCCCAAAACAATACAACTACCATCCTCTTCAAACTACAAGGATATCCAAGATGTCATTTCTAGCTTACCTGAAGAAGATCAACCCGCGTACTTTGGCTTACCTGCGAACATCGAACGCGCTGCTCAAAGAAATATTAGTTCTCAGGTGATTTCTCAATTGAAAGTAATGATGCGATCATCAGTAGGTGCCAACAAGTTCGATAAAGACAAATGGGGTAGTGAACTGGCACCTATACTTAACCTCTGGAAGAAACTCAATCAGGGATCAAAGGTCATCCAACAGAAAGTGTCAGCACCAAAAGACGATGAACGAACACAACCTGTTGAATCTTTCATATTACTTGAACATTATAATGCCATACAACTCGCACAACAAGTTCATGCCTCACTCTCTTCACTTGCAAAAGTCATCAAAGGAACCCAATTGGTCACCAAATCTGTTCAAGAGGTTGCTGGTGCATTGATGCATCACGAAACACCTGGATCGTGGATGAAACTGTGGGAAGGTCCTGAAGATCCTGTCCAATGGTTAAAAGCTATCATGCAGAAGACCAATGCTCTGTCAGTATGGTTGGAGAAAATCCAGGGTGGTTCCTTGTTGTCTAGTGTATTAGATTTGTCGGAGTTGTTCCATCCAGATACTTTCTTGAATGCTTTCAGACAGCAAACTGCTAGATTGAGTAAAACCCCGATGGACAACTTGAAGTTGGTTTCTTCATGGAAATCTGGTGGCATTAATGGAGCACGCCATTCCATCAAGCTCGGTGGTTTGCAACTAGAAGGATGCACTTTTGATGGCAATGCATTATCAGAAAACGAACGTAATTCACCTAGTGTTAGTGCTATCCCGTCATGCACTGTTGCCTGGATACCAAAGGAGCAAGCTGAACCATACCCAGTGGATGATTGCATCGCTTTACCCATCTATTACACTATCAAGCGAGAGAAAATTGTGGCACAACTCAACGTACCAGCCGGCGGAGAGCCCCACAAGTGGATTCAATGTGGCGCCGCCCTATTTTTGAAAAATTAA

Protein

XP_066920851.1

MSQDPRKEFVLATIANYFGISSNDKTITEHQRSKQINSFLDDGNQSILVSILQNGKHVQLYNDLQNNSPDEQCIIFFKLKPEAVTPESIHHNVLVSSMFQSPASTLYHTIKKIFGPLILNGDISNKSVDPKLQNLLSELEDGLGSYLRKTGDFLGGNNKSKEQNFSSILTPADEFQFWSDAANHGDDQAKTFDEIFKKSNFSKDFANLDPLELADVLETVDISMDILDEIWKQDDHKEYPQKRMIHIFDIFGGSIGRYLQKKFSDVDIWKLKFSVVKERLQYSIQICEKWRDVCKNLTEKFWKTYHAHPWKDGNYMPDNLMKLCERFKEILQIRVIHEQHNQLLSSGERQYLSNSQAFQPFAGLNPVQYNPFTVPLWNAAVAQYNKDIEPTEERIATKLREKLSVSKAKSFQLLREFQRYKELINRPSIKKALTAERETLIGQLYEYVKSLKSDFQSKSTFAKGEGPPKGHNMPEIINYIMWGRQLEARVKELLVSSESLLSDTGSFDKFKKFCLSLINEIAVYIKDNYENWIKETTENIDNEALCLKTTGRLMELNHSDGKLEVQYDENLVKLIREVRQFQGLGFNVPSKIQSTSTKAMKFYQQAIILKQVAHFYNTIDKQMVACQQSIMLDTALAFEKLVKNPNSGSKSKGSNTQVTWDNPKEVEQYITKLQIVAEKLTTDNRKLRKCHNVMIEKIVQLMGIDLLRHQTRWKDGLMEMRQTINNLVEQGFKLSNMKPWTLHLDHQLYKALEHQYQLGLEALNEHLPEIKVELVFRQQQLQFRPPFEEIRSKYYREIKKFISIPKNFKGLADNQAMFQNIIQNNSHLFQTVYEKAESLFGRLAAVRTQFEDWVVLGCVDVDQLVEEKLHSVGDWELNIKMIKVKGKEAEKLPLSCKIDCITVSTSPVKSSIDDLLAKLFDTLLISLRSSVVNEYNAIDSFSTKSMEDLNQVPQTIEEMGDVNEKYQKIMAEKPQHKEELTRAQQKNKLLAQTSGSGVEKIVELSQKWEKLEMLLEAHEMMVKGQRETMKKELANRSEAFQQELERFAARWHQLKPANIDADADKKVCMQAISNIKERRVEFNDIVERTKKLQVDCSHFEMESHEFPLIEELETDISTFENMWKLYEEFNTDLEMLSQQDWISFRSQTGKFDDLLGSWVDILKKTEPNVMTLKIQKDVDSYKNLMPVLKYVRGEPLSTDHWMELFRMVKMPKGTTLEKLLFADVLNACDEIIAHRDDLKELNNRAQGEVTIREALKELDLWGAGAVFVLTSYTDTNKKELQLPKDWRDLFNQIGDHQCLLQSLKDSPYYQGFIDKATIWETRLADLDEYLHNLNQIQRKWVYLEPIFGRGALPREQDRFKRVDDDFRSIMFDIERDNRLVSIVSRPGIRNLLVTMLDQLQRCQKSLNEFLEEKRSLFPRFYFIGDEDLLEILGQATNPKVIQTHLKKLFAGIHNVDFDERCQHIIAMKSLDGEVVPLNNPITITDEVEVWLADLAKEMKGTLKKLLTECISASKSGNIDPGKFPSQILCLAEYVLFTERCENAIDTGKLHSFKKELESQLEGYTSAEISGEGVEAKVLELKLKALILDLIHFIDVIDQLQKENIRSTNDWIWQKQLRFKMSKKGECYMTMVDADFEYTYEYQGNAAKLVHTPLTDKCYLTLTQGMKMGLGGNPYGPAGTGKTESIKALGGLFGRQVLVFNCDEGIDVKSMGRIFIGLVKCGAWGCFDEFNRLEEAVLSAVSMQIQSIQAAIKNKHSNIELLGRNIELDTNSGIFITLNPAGKGYGGRQKLPDNLKQLFRPVVMSKPNNELIAEVLLFSEGFKDGKSLGRKLVAIFNLSKELLSFQQHYDWGLRALKTILKGCGNLLQHTKSIMKDSGKKVDIEKEKNLVVQALRLNTLSKLTFSDCKRFDALIQDVFPGINFQDVEYTTLREALRDAMKELGLIESKVQIKKALELYEQMRQRMGVVVVGPSGSGKTCLWKVLMAAMAKIGQTVIKYTMNPKAMPRTQLLGHIDMDTREWSDGVLTNAARQVVREPLEVQSWIICDGDIDPEWIESLNSVLDDNRLLTMPSGERIQFGPNVNFLFETHDLSSASPATISRMGMIFLSNEDTDVQAIVNSWITREAKDNQMLAGWINDYFMKALQYTLKQEAFVVDTTLVGAVLSGLSHMKGVTAKGEFACALMKGLGANLQEESRISLTKEIFKWCGESLPDPSNPLDTYYDKQRGRLVTFQLEVPDNLQTDDFSTTKLPVILTPDVKRNLDAFSRWLETDENRQPFILAGPEGCGKELLLNHTFSKLRSVQVATIHCNAQTSPVHVLQKLAQTCMTISTNTGRVYRPKDCERLVLYLKDINLPKPDKWGTSQLVEFLQQVITYNGFYDFNLEWVGLDGVQIVASMNSTSSVGRHQLSSRFTSIVRIVSIGYPTKSQLETIYTEYLKGLLKEGYQTHSIWGNEKNLKQLAKSTVQIYDFVKSKFTVDDYPHYIFTPRDVTMWILALLRYDIADSSGDSAEALLKVWAYHAKKLFGDRLVGKESREKFDSMLISTARNDWSVSLDDFGSSYYVTWGSTGGIAKTGNVMGSFGRPLGLLSKDDFKQIVSKGLTAYARDTKEIDYLIFNEVLDNVSRMDLVLTQPGGSLVLAGRSGIGRRTAAMLVAHMHQVNVVTPKVGRGYGTKQFKADLKVAMQSAGIDGEQVILLIEDHQLVETEFLELINSLLCSGDVPGLYTSEELDPLLNPLRDQASQDGFRGPMHAYFARRVMCNLHVILVMDSTAPSFVVNCEANPALYKCCSFQWMDGWSKSSMLKIPKMLLNKRNKANEKESNNTIKFAVTDKLCEHFYSIHQTCQKIGATPRLYLSFLQNYVNVYTEKRSGIEKRRGHLQGGVSKLNEATALVDDLKKSAAEQSKLLTEKQAEADAALKGITQSMQDAGNQKIEMEKLKEKQGVEAEKLAKRKKMIEAELSEIGPLLHEAQKAVGNIKGESLNEIRALRMPPEVVRDILEGVLRLMGIMDASWVSMKGFLGKRGVKDEICMFDARSISHDVRESVEELLKSKASSFDPKNARRASVAAAPLAAWCKANVQYSKVIEKIQPLEKEQNDLQKGIDKSQSKLDKLGKALATVDKKVADMKDKFEKRTQEAAKLKVDVEKAQETITAAETLVGKLQGEFKRWSAQVKELTDITEQLPSRAQLASAFITYMGSQPEDIRRKYLKKFCQLVNIEEFDFKKFLSTESEQLVWKGEGLPSDMLSMENAMVILKDSSCPFLVDPSQQATEWLKKHLKEQRLEVINQQDSNFVTALELAVRFGKTLIIQEVDGVEPILYPVLRKDFTSQGPRFVVQIGEKGVDYNENFRIFLTTRNPNPELPPDVSSVVNEVNFTTTRAGLTGQLLALTLQMEKPELEIKKTELLQKEEDLKIQIAELEESLLESLANAEGNILENKELLDSLNKTKSSSSTIAQSLKDAHEVQASLDKERDAYLPLAEHGSAMYFVICDLAKINNMYRFSLSSFLQLFRRALESVKDKGEGSARIKRLEGATQALVYETVCRSLFKDDRLMFALHLVHGIYPKKFEKQEWDFFTGMIVSAVLQNKDSSLSSSLPQWVDEERVADVSNFKSTFSSLFSSLDLGNQQLWSTFGKSSKCEQEFPSSLNKVTPFQQLLVVQMLRPDRLQSAMNQFAAKSLELKALATSSVNLKRLMKETSSKEPILIIVSPGSDPSQELQELATQTVGADRYHQVAMGQGQSEIAMKLLSDCSKNGDWLCLKNLHLVTSWLPKLEKVLNGLQPHEGFRLWLTAETHPKFPTILLQSSLKVTLEAPPGIKKNMQRSYDSWSAKFVQEGNGSSRAQTLFALAWLHALVEERRNFIPQGWTKSYEFSMADLRAGADIIDRLYKMAGSGNIKWDFVHGLFENAIYGGRVDNVFDVRVLTSYLQKYFSETLSNGRGKGNLFPKTIQLPSSSNYKDIQDVISSLPEEDQPAYFGLPANIERAAQRNISSQVISQLKVMMRSSVGANKFDKDKWGSELAPILNLWKKLNQGSKVIQQKVSAPKDDERTQPVESFILLEHYNAIQLAQQVHASLSSLAKVIKGTQLVTKSVQEVAGALMHHETPGSWMKLWEGPEDPVQWLKAIMQKTNALSVWLEKIQGGSLLSSVLDLSELFHPDTFLNAFRQQTARLSKTPMDNLKLVSSWKSGGINGARHSIKLGGLQLEGCTFDGNALSENERNSPSVSAIPSCTVAWIPKEQAEPYPVDDCIALPIYYTIKREKIVAQLNVPAGGEPHKWIQCGAALFLKN

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9JJ79	Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1
Q27802	Cytoplasmic dynein 2 heavy chain 1 OS=Tripneustes gratilla OX=7673 GN=DYH1B PE=2 SV=2
Q45VK7	Cytoplasmic dynein 2 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync2h1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002128 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21264 all species →	DYNC2H1_AAA_dom	Cytoplasmic dynein 2 heavy chain 1, AAA+ ATPase domain	Domain	Interproscan
PF03028 all species →	Dynein_heavy	Dynein heavy chain region D6 P-loop domain	Domain	Interproscan
PF12780 all species →	AAA_8	P-loop containing dynein motor region D4	Domain	Interproscan
PF08393 all species →	DHC_N2	Dynein heavy chain, N-terminal region 2	Family	Interproscan
PF18199 all species →	Dynein_C	Dynein heavy chain C-terminal domain	Domain	Interproscan
PF18198 all species →	AAA_lid_11	Dynein heavy chain AAA lid domain	Domain	Interproscan
PF08385 all species →	DHC_N1	Dynein heavy chain, N-terminal region 1	Family	Interproscan
PF12775 all species →	AAA_7	P-loop containing dynein motor region	Domain	Interproscan
PF12774 all species →	AAA_6	Hydrolytic ATP binding site of dynein motor region	Domain	Interproscan
PF12781 all species →	AAA_9	ATP-binding dynein motor region	Domain	Interproscan
PF12777 all species →	MT	Microtubule-binding stalk of dynein motor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR049400 all species →	Domain	Cytoplasmic dynein 2 heavy chain 1, AAA+ ATPase domain	Interproscan
IPR042222 all species →	Homologous_superfamily	Dynein heavy chain, domain 2, N-terminal	Interproscan
IPR004273 all species →	Domain	Dynein heavy chain region D6 P-loop domain	Interproscan
IPR042219 all species →	Homologous_superfamily	Dynein heavy chain AAA lid domain superfamily	Interproscan
IPR024317 all species →	Domain	Dynein heavy chain, AAA module D4	Interproscan
IPR013602 all species →	Domain	Dynein heavy chain, linker	Interproscan
IPR043160 all species →	Homologous_superfamily	Dynein heavy chain, C-terminal domain, barrel region	Interproscan
IPR026983 all species →	Family	Dynein heavy chain	Interproscan
IPR041228 all species →	Domain	Dynein heavy chain, C-terminal domain	Interproscan
IPR042228 all species →	Homologous_superfamily	Dynein heavy chain, linker, subdomain 3	Interproscan
IPR041658 all species →	Domain	Dynein heavy chain AAA lid domain	Interproscan
IPR013594 all species →	Domain	Dynein heavy chain, tail	Interproscan
IPR035699 all species →	Domain	Dynein heavy chain, hydrolytic ATP-binding dynein motor region	Interproscan
IPR035706 all species →	Domain	Dynein heavy chain, ATP-binding dynein motor region	Interproscan
IPR043157 all species →	Homologous_superfamily	Dynein heavy chain, AAA1 domain, small subdomain	Interproscan
IPR024743 all species →	Domain	Dynein heavy chain, coiled coil stalk	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10676 all species →	DYNEIN HEAVY CHAIN FAMILY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008569 all species →	Molecular Function	minus-end-directed microtubule motor activity	Interproscan
GO:0030286 all species →	Cellular Component	dynein complex	Interproscan
GO:0005868 all species →	Cellular Component	cytoplasmic dynein complex	Interproscan
GO:0005930 all species →	Cellular Component	axoneme	Interproscan
GO:0035721 all species →	Biological Process	intraciliary retrograde transport	Interproscan
GO:0045505 all species →	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959 all species →	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0060294 all species →	Biological Process	cilium movement involved in cell motility	Interproscan
GO:0097729 all species →	Cellular Component	9+2 motile cilium	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10414	DYNC2H, DNCH2; dynein cytoplasmic 2 heavy chain	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_066920851.1 across 40 RNA-seq samples of Clytia hemisphaerica. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

40Samples

40TPM > 0

16Conditions

56.8Max TPM

16.2Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
Mature medusa	5	5	20.86	48.48
medusa · Experiment Condition A1	4	4	10.06	10.58
medusa · Experiment Condition A2	4	4	22.74	23.97
medusa · Experiment Condition A3	4	4	51.70	56.80
Early gastrula	2	2	18.60	19.60
Planula 24hpf	2	2	11.24	12.23
Planula 48hpf	2	2	9.72	10.15
Planula 72hpf	2	2	10.86	12.45
Primary polyp	2	2	6.22	6.52
Gastrozooid	2	2	8.35	9.19
Gonozooid	2	2	3.95	4.15
Stolon	2	2	5.35	6.48
Baby medusa	2	2	5.60	5.94
medusa · Experiment Condition B1	2	2	4.00	4.08
medusa · Experiment Condition B2	2	2	9.73	10.38
Mixed	1	1	18.90	18.90

Per sample · hover a bar for the full sample record

Show the sample table (40 samples)

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
ERR2816250	Mature medusa	not recorded	Mature medusa	not recorded	ERP110164	48.48
ERR2816251	Mature medusa	not recorded	Mature medusa	not recorded	ERP110164	34.65
ERR2862245	Mature medusa	not recorded	Mature medusa	not recorded	ERP110164	10.67
ERR2816249	Mature medusa	not recorded	Mature medusa	not recorded	ERP110164	6.33
ERR2816248	Mature medusa	not recorded	Mature medusa	not recorded	ERP110164	4.19
ERR3299478	medusa · Experiment Condition A1	not recorded	medusa	Experiment Condition A1	ERP115020	10.58
ERR3299475	medusa · Experiment Condition A1	not recorded	medusa	Experiment Condition A1	ERP115020	10.12
ERR3299477	medusa · Experiment Condition A1	not recorded	medusa	Experiment Condition A1	ERP115020	9.88
ERR3299476	medusa · Experiment Condition A1	not recorded	medusa	Experiment Condition A1	ERP115020	9.65
ERR3299481	medusa · Experiment Condition A2	not recorded	medusa	Experiment Condition A2	ERP115020	23.97
ERR3299482	medusa · Experiment Condition A2	not recorded	medusa	Experiment Condition A2	ERP115020	23.94
ERR3299479	medusa · Experiment Condition A2	not recorded	medusa	Experiment Condition A2	ERP115020	21.54
ERR3299480	medusa · Experiment Condition A2	not recorded	medusa	Experiment Condition A2	ERP115020	21.49
ERR3299486	medusa · Experiment Condition A3	not recorded	medusa	Experiment Condition A3	ERP115020	56.80
ERR3299485	medusa · Experiment Condition A3	not recorded	medusa	Experiment Condition A3	ERP115020	55.98
ERR3299484	medusa · Experiment Condition A3	not recorded	medusa	Experiment Condition A3	ERP115020	47.34
ERR3299483	medusa · Experiment Condition A3	not recorded	medusa	Experiment Condition A3	ERP115020	46.67
ERR2816230	Early gastrula	not recorded	Early gastrula	not recorded	ERP110164	19.60
ERR2816231	Early gastrula	not recorded	Early gastrula	not recorded	ERP110164	17.60
ERR2816233	Planula 24hpf	not recorded	Planula 24hpf	not recorded	ERP110164	12.23
ERR2816232	Planula 24hpf	not recorded	Planula 24hpf	not recorded	ERP110164	10.26
ERR2816234	Planula 48hpf	not recorded	Planula 48hpf	not recorded	ERP110164	10.15
ERR2816235	Planula 48hpf	not recorded	Planula 48hpf	not recorded	ERP110164	9.28
ERR2816237	Planula 72hpf	not recorded	Planula 72hpf	not recorded	ERP110164	12.45
ERR2816236	Planula 72hpf	not recorded	Planula 72hpf	not recorded	ERP110164	9.26
ERR2816239	Primary polyp	not recorded	Primary polyp	not recorded	ERP110164	6.52
ERR2816238	Primary polyp	not recorded	Primary polyp	not recorded	ERP110164	5.92
ERR2816241	Gastrozooid	not recorded	Gastrozooid	not recorded	ERP110164	9.19
ERR2816240	Gastrozooid	not recorded	Gastrozooid	not recorded	ERP110164	7.52
ERR2816243	Gonozooid	not recorded	Gonozooid	not recorded	ERP110164	4.15
ERR2816242	Gonozooid	not recorded	Gonozooid	not recorded	ERP110164	3.75
ERR2816245	Stolon	not recorded	Stolon	not recorded	ERP110164	6.48
ERR2816244	Stolon	not recorded	Stolon	not recorded	ERP110164	4.22
ERR2816246	Baby medusa	not recorded	Baby medusa	not recorded	ERP110164	5.94
ERR2816247	Baby medusa	not recorded	Baby medusa	not recorded	ERP110164	5.27
ERR3299472	medusa · Experiment Condition B1	not recorded	medusa	Experiment Condition B1	ERP115020	4.08
ERR3299471	medusa · Experiment Condition B1	not recorded	medusa	Experiment Condition B1	ERP115020	3.93
ERR3299473	medusa · Experiment Condition B2	not recorded	medusa	Experiment Condition B2	ERP115020	10.38
ERR3299474	medusa · Experiment Condition B2	not recorded	medusa	Experiment Condition B2	ERP115020	9.08
ERR2862244	Mixed	not recorded	Mixed	not recorded	ERP110164	18.90

Source: CnidoSite RNA-seq expression matrices (CHEMI_TPM, StringTie quantification over 40 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

Co-expression network

Genes whose expression across the transcriptome samples of Clytia hemisphaerica tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.

Direction	Partners	Most correlated partner	PCC
Positively correlated	17	XP_066928895.1	0.951746209405521
Negatively correlated	12	XP_066928023.1	-0.811282289194812

Open this gene in Network Analysis → The network opens with the gene already entered and both directions selected. There you can add up to 9 more genes, switch between the positive and negative network, and export the edge list.

Single-cell expression

Whether this gene can be visualised in the single-cell atlases of Clytia hemisphaerica, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.

No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.

Epigenetic marks

Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.

No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.

What you can do with this gene

Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.

Analysis	What it does	Status
Primer design	Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed.	template found	open →
BLAST	Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start.	template found	open →
Expression heatmap	Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it.	ready	open →
Gene family / orthogroup	Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue.		open →
Gene set analysis	Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it.		open →