Gene detail

Detailed information of XP_066921001.1 in Clytia hemisphaerica

Genomic Location: NW_027103875.1:432347...440180
NR annotation: XP_002162097.2, E3 ubiquitin-protein ligase RNF13 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q0VD51	E3 ubiquitin-protein ligase RNF13 OS=Bos taurus OX=9913 GN=RNF13 PE=2 SV=1
Q66HG0	E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus OX=10116 GN=Rnf13 PE=2 SV=1
O54965	E3 ubiquitin-protein ligase RNF13 OS=Mus musculus OX=10090 GN=Rnf13 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13639	zf-RING_2	Ring finger domain	Domain	Interproscan
PF02225	PA	PA domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR003137	Domain	PA domain	Interproscan
IPR051826	Family	E3 ubiquitin-protein ligase domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006511	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15692	RNF13, RZF; E3 ubiquitin-protein ligase RNF13	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala