Gene detail

Detailed information of XP_066921012.1 in Clytia hemisphaerica

Genomic Location: NW_027103875.1:155838...175516
NR annotation: XP_052434671.1, B-cell lymphoma 3 protein homolog isoform X2 [Carassius gibelio]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_066921012.1

ATGCCCAAACCATATTCAAATCACTCAAAGAAAGCAGAAGAAAATACAGAAAGATTTCAGAAAGCTTTGCAAAGCAAAATGGCACAATCAGTTGCTACTTTGAAGACAACAAAGGTTGAAGGGCTAAGCAATTTGGTTGATGCTGCAAGATTTGTTGAGAAAACTAACTCATCCAAAATCACAAAGAAAGCTAAACCTAAACCAATTTACAAGGGGAAAGAAAGAGGGAAGGAAAAGAAATCTCACAGAGAATCAAAACATTTGATTGTTGAGGATACAGATGCAGATGATGAAACTAGCGATATTGAGAGTGAAGTGGAATCTGACTCCCAACTTGCTTTGCTAAAGAAATCTGTCAGTGAAATGATGGCAAAAATTCAGAGACTTGAGAGCAAACGTAAACGCAAGAAAATGCCTAAGAAAGCTCATTTATCAGATTACGAGGATTCGAGTGATGAAGATGTAAAACCTAAAAAGCCTCTAAAAAAGGAATCTAGCCCGCCCACAAAACCTATTAATGCAAATCAACAGCTTACAATGCATTCCCAGCAAATGATGCAGATGCAGCAGCAATACTGGCAGATGCAGCAAATGATGAACATGTATTCAAACCCTTCCATTAATCCCGCGGGGATGATGCCTTCAATGCCTTTCATGACAACACAGCATCAACAACAACCAAGTTTTGTTAACATGAACTCAAAGAGTGCATCAAATACTTTACGTTTTCCCAAAACCAAGAAACCAAATGCTGAAACACGTTTCAAAGATTCGTCAAAAATTGAAGATAAAAAATCTCGGAAAAGTGTTGAAGGAGAAGCTGGCGAGGAAACAGATGCTTCAGAAGTTTACGCACCCACTGCAATCAAGGACCCTATCAATGAATATCTTGGCAAGGATCCATTTGTACCCACCCCTTCATTTATTTCATTCGTTGATGACATCACAAAGGATGAAAAGACTGTTCAAAGCACTGTTGTTTCGAGCACAAAACGTGCTGCTGAGACCAGTAAGGTACCCGGTAGTGATATTCCAAGAGCCTTGTTTCAAAGAAATGACTCCATAACAAATACACAGCAAATTTCAGCAACCAATCAAGGAAACCCTAGTTATGCAGGAATACTTATGAACCTTTTCCCAACTGGCAAACCTAATCCTTTAGAAATAAGAGAAAATGATAAAAGAAGTGAAGAAATCAATACAGTACTTCGTTCAATGATTGGATACAACCCAGTGGATGCCAAACCAAAACAACCAAAGAGATTCGATCTCTCCGCTGATAGACACACTCATTCTAAACCTCTTTTTCAAAACTTACTTCCCATATCTAAACACTCTCAGTCACCTATTCCTTCTGATAATGCTCCAGAATCAAAACGTTTTGTTGACAACGCAACCTGGCTTCGAGAATGTTCTAAGAAAATGGACCTGCAAGATCAAGAGGGCGACACGATTCTGCATATTTTGATTGCAAAAGAAGAAACTCCAAAAGCCATCGAAGTCATCAAGAAAATGCAACACCTTCCTTCCCTGGATATCCTCAACGCCTTGGGACAGACGCCTCTTCACTTGGCAATGTATACAAAGAACTTGCCAGTGGTTAAGGAGTTGTTGCAGCACGGATCTGATGTCAGTTTGGTGGACGCCCATGGGAACAATCCTCTACACATCGCATGCGAGGAAAATTCCATTGAGATGTTAGAAATTGTATTCAATGAAGGTCTTTCACATTACCAGACAGCAACCAACACTTCTGCGATGATCACAACCCTGGCACCTGAATACTTTCATATCATTAACGCGCGAAACAACCAAGGTCTTGCAGCGTTACACATTGCAGCGAAGGAAGACAATGAAGTGATCATCAAATTCCTGGGCGAACGAGGTGCTGAAATGAACAACCAGGAGGGACGTTCTGGAAACACGCCACTGTTAATCGCCCTTATGAAGAACAATTGGAAGATGGCTTCCTTTCTTCTCGAACGATTTGTCAATGTCAACATTCCGAACTTTTCGAACTTTTATCCGTTACATTTTGCAGTACAGGGCAACCATGTGGAGATGGTGAAAGCTCTTTTGTCACGTGGTGCAGAAATGGGAAGCAGAGCCAATGATTATGATCAAAATGCGAACACAACAGAGATCAAGCAACTGTTGGCCAAAGAAATGCGAAGAAGAAGGAGGAATCGCATCAAACTAGAGCCTAAATCTCAAATGTGA

Transcript

Protein

Uniprot

Uniprot term	Description
P20749	B-cell lymphoma 3 protein OS=Homo sapiens OX=9606 GN=BCL3 PE=1 SV=2
Q04861	Nuclear factor NF-kappa-B p105 subunit OS=Gallus gallus OX=9031 GN=NFKB1 PE=2 SV=2
P19838	Nuclear factor NF-kappa-B p105 subunit OS=Homo sapiens OX=9606 GN=NFKB1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR051070	Family	NF-kappa-B Inhibitor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46680	NF-KAPPA-B INHIBITOR ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06867	K06867; uncharacterized protein	-	Function unknown	-	deepkoala