Gene detail

Detailed information of XP_066921282.1 in Clytia hemisphaerica

Genomic Location: NW_027103890.1:1215226...1437946
NR annotation: XP_047136116.1, tyrosyl-DNA phosphodiesterase 1 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q4G056	Tyrosyl-DNA phosphodiesterase 1 OS=Rattus norvegicus OX=10116 GN=Tdp1 PE=1 SV=1
Q8BJ37	Tyrosyl-DNA phosphodiesterase 1 OS=Mus musculus OX=10090 GN=Tdp1 PE=1 SV=2
Q9NUW8	Tyrosyl-DNA phosphodiesterase 1 OS=Homo sapiens OX=9606 GN=TDP1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06087	Tyr-DNA_phospho	Tyrosyl-DNA phosphodiesterase	Family	Interproscan
PF10283	zf-CCHH	PBZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010347	Family	Tyrosyl-DNA phosphodiesterase I	Interproscan
IPR019406	Domain	Aprataxin and PNK-like factor, PBZ domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12415	TYROSYL-DNA PHOSPHODIESTERASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0008081	Molecular Function	phosphoric diester hydrolase activity	Interproscan
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0017005	Molecular Function	3'-tyrosyl-DNA phosphodiesterase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10862	TDP1; tyrosyl-DNA phosphodiesterase 1	EC:3.1.4.-	DNA repair and recombination proteins	ko03400	deepkoala