Gene detail

Detailed information of XP_066921630.1 in Clytia hemisphaerica

Genomic Location: NW_027103288.1:83030...97368
NR annotation: XP_047127988.1, protein SON [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_066921630.1

ATGGCAGATACAGTTACAGAGGAGTCTGGACAAGAGTCTTGTTGGTCGTCATCTGATGAGAGATCATCTGGTAATGAATATTCAGTCAAAATGAAGAATGAAAAACTTCCCGAAGACGAAGCACTGAAGGAGCTGTATCGGAAAAAGAAGAAGAAAAAGAAACATAAACGAAAACACAAGAAGAAGAAAGATCGGACTGCTGATTCCTCAGATGAAGAAGATCAGAAAGAAGGTGAAGGTAAAAAGAACAAAGAAGAAAAGAAGAAAGCAAATGGCGTCATTAAAAGCAATCAATTGTTGTTGAAAGTAGACGCCATCTTGGAGAGTGCACTGTCAGCAGTCGAAGAGAAAAACAACATCAAGAAAGATTCTAGTATTAAAGACACAAAGAAAACTGTTGTCGAGGATGTTAAGAAAAATTCCAACAAAGACAATAAACGAACTTCGAAGACCCGATCAAGGTCGAAAGATCGAGGTGAATCGAAGAAACATTCTCGTTCAAAGTCGAGAGAGAAAAGAAAGCGTTCGAGATCTAGAGATCGAAAAAGAAGTCGTTCAAGGTCCAGAGATCGTAAAAGAAGTCGTTCAAGGTCTAAAGATCGAAAAAGGAGCCGTTCTAGGTCTAAAGATCGAAAAAGAAGTCGTTCTCGGTCCAGAGATCGAAAGAGAAGTCGGTCCAGATCCAGGGACCGCAGAAGAAGTCGTTCGAGGTCCAGAGACCGCAGGCGATCACGGTCTAGGGAGCGGCGCAGTCGAAGATCTCGATCAAGATCAAAAGATCGGCGTCGAAGGTCGAGGTCACGATCAAGGTCCAAGGATCGTCGACGTCGCTCCAGATCAAGGTCCAGAGACCGTAGACATAGATCAACCTCTAGAGATCGCCGTCATCGTTCACGATCTAAAAGTCGAAATAGAGAAACTGTAGACACTAAACAAGACATCGAGGGTCCAGTACCATCGAAATGGGACGTTAAAGAAACTGAAGCAATGAGAATAGTTAATGCAGAAACTGACAATGTATTTCAAAAAGTATCAGCACTCCGTAGATCCGGAATTGAAATCAAGTACGGGAACACAGTACCGGGTAAAGATGCACGGGATATTCTTAACGCAAAAGCTAAATCATCATCCACCTCTAAGAAAGAACGCTCAGATCCATATGGGAAATGGGAATCAGTGCCCGATGGTGGAAACCGTGATTTGAATAAATTCACAAAACTGTGTTTAGAAATTTCAGCCAAAGATAGCAAATACGATAGCCATCTTGCTGATAGTAGGCGGAGTAGTGACGATGATGAAGCTGAGATCCACCATCCATTCATATCGAAGCCAGCACCCATGATGTTCCCATCTTCCTCAGGAGGGTACAGTGGAAGTAGTAGAAGCAGGATTGCTATGAATCCCGCACAAGCTATCATGGCAGGTTCAATGAATTCCATCACAGCCAACCCAGCGGACATCATCACTGGCCCGTTAGAGAAACATTTCCCTGTTTCTGCGGGTAATGACCATCGTGAAAAGGAGAACGCGAAGGGAGAAGAAGCTGACCTTCCTGTCTATGAAGAAGTTGACGAAGGACCCACAAAGCCAATCAACGTAAGCGCTGTAATCGGGCGGCGTATGGGCGCCCAACAACGTTTGAACGCTAATCCGAACGATCAGTTAGCGCGTTCGGTTTTAGAAGAATGTGATTTGAAACTTAAAGGATGGACTGAGAAGAATCGAAAACCGGGCAAATTTACCGGTGAACGAGGCGTGCTGATGAACAAGAAAGAGATTGCAGGTGCCGTAGAAACCTGGGTCCGAAAGGATTTCTTTCACAATTTGATGCCAGTATGTGGAGGTGTTGGTATGCGAATGTTGAAAAATATGGGTTGGAAACAAGGAACTGCTCTTGGCAAAAATCGCGAAGGATATGTGGCACCGGTTACTTTTGACGTCAAAGTTGGTCGCAGTGGATTAGCTTCTCAAGAGGAACAACCTCAAAGAGGGCGTGGCTTGTATGGAAATAACTCCTTCCAACGAAGCAATTTACCGAAGAAAAAACTTGCACCTGTCAATAATATAGGAGGCAAACACCCGGTATCGGTATTAGCAGAGAATTGTTCTAAAAGAAAGATGGGGATGCCAGAATACGAATGTGTGTTCGAAGGTGGTTCATCACACAATAAGACTTTCCTCATCAAATGCACCATACAGAATGTAGACTATCAACCTTCAGTTGCATCTCCAAACAAAAAACACGCCAAAGCTCAGGCTGCAATGACTGCTCTTAAAATCCTGGGTTTTGATCAATGA

Transcript

Protein

Uniprot

Uniprot term	Description
Q6DCD0	Spermatid perinuclear RNA-binding protein OS=Xenopus laevis OX=8355 GN=strbp PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00035	dsrm	Double-stranded RNA binding motif	Domain	Interproscan
PF01585	G-patch	G-patch domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000467	Domain	G-patch domain	Interproscan
IPR014720	Domain	Double-stranded RNA-binding domain	Interproscan
IPR032922	Family	Protein SON	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46528	PROTEIN SON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0043484	Biological Process	regulation of RNA splicing	Interproscan
GO:0048024	Biological Process	regulation of mRNA splicing, via spliceosome	Interproscan
GO:0051726	Biological Process	regulation of cell cycle	Interproscan