Gene detail

Detailed information of XP_066922621.1 in Clytia hemisphaerica

Genomic Location: NW_027103947.1:108115...112545
NR annotation: XP_020900174.1, sprT-like domain-containing protein Spartan isoform X2 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
F6UH96	DNA-dependent metalloprotease SPRTN OS=Xenopus tropicalis OX=8364 GN=sprtn PE=2 SV=2
Q9H040	DNA-dependent metalloprotease SPRTN OS=Homo sapiens OX=9606 GN=SPRTN PE=1 SV=2
A0A0G2L7I0	DNA-dependent metalloprotease SPRTN OS=Danio rerio OX=7955 GN=sprtn PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10263	SprT-like	SprT-like family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006640	Domain	SprT-like	Interproscan
IPR006642	Domain	Rad18, zinc finger UBZ4-type	Interproscan
IPR044245	Family	SprT-like domain-containing protein Spartan	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21220	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006974	Biological Process	DNA damage response	Interproscan
GO:0031593	Molecular Function	polyubiquitin modification-dependent protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24051	SPRTN; SprT-like domain-contaning protein Spartan	-	DNA repair and recombination proteins	ko03400	deepkoala