Genomic Location: NW_027103949.1:566410...571981
NR annotation: XP_027057344.1, E3 ubiquitin-protein ligase TRIM71-like [Pocillopora damicornis]
| CDS | ||||
| XP_066922732.1 | ||||
| Transcript |
| - |
| Protein |
| XP_066922732.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF13445 | zf-RING_UBOX | RING-type zinc-finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR027370 | Domain | Zinc finger, RING-type, eukaryotic | Interproscan |
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR047153 | Family | TRIM45/56/19 | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR25462 | BONUS, ISOFORM C-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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