Genomic Location: NW_027104020.1:1419558...1426989
NR annotation: XP_002166177.1, RNA cytosine-C(5)-methyltransferase NSUN2 [Hydra vulgaris]
| CDS | |||||
| XP_066924201.1 | |||||
| Transcript |
| - |
| Protein |
| XP_066924201.1 |
| Uniprot term | Description |
|---|---|
| Q28E61 | RNA cytosine-C(5)-methyltransferase NSUN2 OS=Xenopus tropicalis OX=8364 GN=nsun2 PE=2 SV=1 |
| Q5ZLV4 | RNA cytosine-C(5)-methyltransferase NSUN2 OS=Gallus gallus OX=9031 GN=NSUN2 PE=2 SV=1 |
| Q4V7N2 | RNA cytosine-C(5)-methyltransferase NSUN2 OS=Xenopus laevis OX=8355 GN=nsun2 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01189 | Methyltr_RsmB-F | 16S rRNA methyltransferase RsmB/F | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR023267 | Family | RNA (C5-cytosine) methyltransferase | Interproscan |
| IPR049560 | Domain | SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core | Interproscan |
| IPR018314 | Conserved_site | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site | Interproscan |
| IPR001678 | Domain | SAM-dependent methyltransferase RsmB-F/NOP2-type domain | Interproscan |
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR023270 | Family | tRNA (C5-cytosine) methyltransferase, NCL1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22808 | NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001510 | Biological Process | RNA methylation | Interproscan |
| GO:0008173 | Molecular Function | RNA methyltransferase activity | Interproscan |
| GO:0000049 | Molecular Function | tRNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0008168 | Molecular Function | methyltransferase activity | Interproscan |
| GO:0016428 | Molecular Function | tRNA (cytidine-5-)-methyltransferase activity | Interproscan |
| GO:0030488 | Biological Process | tRNA methylation | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K15335 | NSUN2, TRM4; tRNA (cytosine34-C5)-methyltransferase | EC:2.1.1.203 | Transfer RNA biogenesis | ko03016 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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