Gene detail

Detailed information of XP_066924497.1 in Clytia hemisphaerica

Genomic Location: NW_027104039.1:271865...276714
NR annotation: XP_050407278.1, uncharacterized protein LOC130010374 isoform X1 [Patella vulgata]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_066924497.1

ATGGATGAAATATACGCAGCGATTAAGAAGAAGGATTTGACCTCCTTGTCCAACCTGATTACCAGCAAGAACATCAACACATCTGACAAATCGAAACAAACACCTCTGACGTTAGCTTGCGAACAAGGTCATTTAGATGTCGTCAAGTTTCTCGTTGAAGATAAGAAAGCAAACGTAGATCGAAAAGATGGTAAATCAAATACACCTTTGTATGTAGCTTGTCTTGCCGATCACCGACCCATCATCACTTACTTGCTAGAGAAGAATGCGGATATCAATAAACCGGCAAGGAATAACTTCACTCCTGTTTATGCTGCAGTTGAGAAAGATAATCTAGAGTTGCTTGAATATCTTGTGTCAGTCAAAGCTGATTTAAATGCCAAATGTTCCAGAGGTGGATTAATCAGACACGCCTGCTGCAAATGTGATGCACCAAAATGTTTCGATTACTTGTTAAAGAAGAAGCTTGATCTGAACACTTACCATGAACAATTGGAACAGTATCTTAGCTTTGAGCTGTCTTTCCAATACCTTGCTCGACGAAAAGATGAAGCAAGAGCCAAAACCACCATGGAGTACCTCAAAAAGCTACTCAAGGCGGGTGCAGATACATCACTCTTAAGTAAAACCAAAGGTCGCGAAGAAACACCCCTTCATGTCGCTGCTAAATGTGTCGACAATGAATTGATGTCAGTTCTATTGGAGCATGGTGCTAACGTGAACCAAAAATCTGCAAACGGTGCCACACCCTTGCTCTCTTTGTTTTTCTTGGAGCGTAGTAAGGACCCGAAAGCAGAAAGTGCACGCAAAGTGATGCCCATAGAATGTGTACAGACACTTTTCAAATACAAAGCTGACCCGAACATCCCGAATGCTGCCGGTGTTACACCGTTTCTCTACTTCATGTCGTCTTTTTTCTACGGCTTGAAGGAGGATGCCCAATTCCTAAAAATGTTCTTGGAAAATGGAGCGGACGTTAATGTCAGTGATTTTGCTGGTGAGAAACCGATCCATTTTGCAGCTGGTAAACAGGGCACGAAAGTCATTGATTGCATCAAGATGTTAGTTAGTCATGGGGCGGATATCAATACGCCTGATGGGAATGGTGAAAATGTCATCCACTTGGTTGCTAGAAGACAAGAGAGTAGCCGTATGTCCTTTTTTGAAGAACTGCCTTGGGATGTTTTGATTGAGAATGGTGCGAAGATTAAAGCTAACAAAGAAGGCGATTATCCTCATTTCGTAGCTTTTATGTCCAATCGATTTGAAGTCTTTAAATCTATGCTTAAAAATGGTATTGACATCAATGTGCGAAACAAGAAAGGTGAAACATTTCTTCACATGTTGCTTCGACGATATATTGAAAACGGGGCAAGGTGGGGACAGGATCCAGTCGAAGAAACGATTCAACGCATGGCCAATTGCGACGATCCTGCCGATTTTCCAAAATTTGACCTTTACCTCAAAGATAAGAAAGGTCAAGATTTTTATGATATTCTTATGAAAGGTGGTTACGGGTACAATTGGAGAAAGCAGTTTGATTTGTTGAAACAGAATGGCTATGATACACCAACATTAGACAGGTGGAACCGTCGTATGCGAGAAGGCGATAACCCGGAAAATATGGATGTAAGTGGTGGTAGAGCTGCTGGCGGATTTGATTCGGTAAGACAGCTAGCATCTAGAGGTGCGCCTGCCCGAGGTGTTCCTTCGAGAGGTGCAGGCAACAGAGCTATGAAATTCGATATGGGATCCCAATCCAAACGTACAACAGGTTCAAGACCAATTGCTGAACGATCGCCACTGACTCCTACAAAATCACCGAAATCATCTCCTTCAAACGAAGTCAATAATGAGAAAAAGACAGCCGGACCGCCTTTAAAAGCGACGCCGGAGACGGAACCGAAACCAGAACCAGAGCCAGAACCGGAGCCAGAACCGGAGCCGGAACCAAAACAGGCGGAAGAGGCGGAAGAGGACGAAGACGCCCCAAAGGATGTGATGATTTCTTACAACTGGGGTCACCAAGCAACGGCATTCAAGATACGTGATTACTTGCGCGATAACAGCAAACTGTCCGTATGGATTGACACGGAGAAAATGTCAGGTGACATTTACGGGAAAATGGCGCAAGCGGTTTACAAGTCCAAGGTTATTGTTATGTGTTTGAGTGAAAAGTATGAGATGTCGGATAATTGTAAGTTTGAGTACGAATATGCTGCCAAGAAGAAGAAGAATTTTGTGCCAGTAATGGTTCAACCAGATTATGAGCCGAGAGGAGGGTTCAGTTTGGATATGATTTTGGGAAGCAAGTTGTATTATGAGCTATTCGAGGAGAAAGACTTTAAGGAAAACATTCCGAATGTTTTGAAAGCTATTCAAGGAGTTTTGGAAAAGATGTAA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13676	TIR_2	TIR domain	Domain	Interproscan
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13857	Ank_5	Ankyrin repeats (many copies)	Repeat	Interproscan
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR000157	Domain	Toll/interleukin-1 receptor homology (TIR) domain	Interproscan
IPR035897	Homologous_superfamily	Toll/interleukin-1 receptor homology (TIR) domain superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24118	POTE ANKYRIN DOMAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06867	K06867; uncharacterized protein	-	Function unknown	-	deepkoala