Detailed information of XP_066924696.1 in Clytia hemisphaerica

Genomic Location: NW_027104054.1:291229...317153
NR annotation: XP_047137813.1, putative autophagy-related protein 11 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P97868E3 ubiquitin-protein ligase RBBP6 OS=Mus musculus OX=10090 GN=Rbbp6 PE=1 SV=5
Q7Z6E9E3 ubiquitin-protein ligase RBBP6 OS=Homo sapiens OX=9606 GN=RBBP6 PE=1 SV=1
P35728Protein MPE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MPE1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD|DWNN
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08783DWNNDWNN domainDomainInterproscan
PF13696zf-CCHC_2Zinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR014891DomainDWNN domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR025829DomainZinc knuckle CX2CX3GHX4CInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR003613DomainU-box domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15439RETINOBLASTOMA-BINDING PROTEIN 6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan

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