Gene detail

Detailed information of XP_066925781.1 in Clytia hemisphaerica

Genomic Location: NW_027104101.1:4132616...4140884
NR annotation: APW77288.1, Sox23 [Hydractinia echinata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q20201	Transcription factor sox-3 OS=Caenorhabditis elegans OX=6239 GN=sox-3 PE=2 SV=1
P47792	Transcription factor Sox-19a OS=Danio rerio OX=7955 GN=sox19a PE=1 SV=2
Q67EX7	Sex-determining region Y protein OS=Moschus berezovskii OX=68408 GN=SRY PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009071	Domain	High mobility group box domain	Interproscan
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR050140	Family	SRY-related HMG-box transcription factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10270	SOX TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0009653	Biological Process	anatomical structure morphogenesis	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan