Gene detail

Detailed information of XP_066926060.1 in Clytia hemisphaerica

Genomic Location: NW_027104114.1:1430355...1443346
NR annotation: XP_047144279.1, chitinase domain-containing protein 1 [Hydra vulgaris]
Species abbreviation CHEMI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q66IL0	Chitinase domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=chid1 PE=2 SV=1
Q68EX9	Chitinase domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=chid1 PE=2 SV=1
A0JPQ9	Chitinase domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chid1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005838 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00704 all species →	Glyco_hydro_18	Glycosyl hydrolases family 18	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011583 all species →	Domain	Chitinase II	Interproscan
IPR029070 all species →	Homologous_superfamily	Chitinase insertion domain superfamily	Interproscan
IPR001223 all species →	Domain	Glycoside hydrolase family 18, catalytic domain	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46066 all species →	CHITINASE DOMAIN-CONTAINING PROTEIN 1 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008061 all species →	Molecular Function	chitin binding	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0012505 all species →	Cellular Component	endomembrane system	Interproscan
GO:0070492 all species →	Molecular Function	oligosaccharide binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17525	CHID1; chitinase domain-containing protein 1	-	Lectins	ko04091	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.