Gene detail

Detailed information of XP_066927334.1 in Clytia hemisphaerica

Genomic Location: NW_027104184.1:666194...673226
NR annotation: XP_047139748.1, putative histone-lysine N-methyltransferase PRDM6 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P0C6Y7	Histone-lysine N-methyltransferase PRDM9 OS=Rattus norvegicus OX=10116 GN=Prdm9 PE=3 SV=1
Q9QZP2	PR domain zinc finger protein 4 OS=Rattus norvegicus OX=10116 GN=Prdm4 PE=2 SV=1
Q96EQ9	Histone-lysine N-methyltransferase PRDM9 OS=Mus musculus OX=10090 GN=Prdm9 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21549	PRDM2_PR	PR domain zinc finger protein 2, PR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046341	Homologous_superfamily	SET domain superfamily	Interproscan
IPR052296	Family	Transcriptional Repressor and Histone Methyltransferase	Interproscan
IPR001214	Domain	SET domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16516	AGAP007109-PA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09287	RAV; RAV-like factor	-	Transcription factors	ko03000	deepkoala