Genomic Location: NW_027104206.1:172516...262489
NR annotation: XP_047143332.1, uncharacterized protein LOC100197328 [Hydra vulgaris]
| CDS | ||||
| XP_066927868.1 | ||||
| Transcript |
| - |
| Protein |
| XP_066927868.1 |
| Uniprot term | Description |
|---|---|
| Q2EG98 | Polycystin-1-like protein 3 OS=Mus musculus OX=10090 GN=Pkd1l3 PE=1 SV=3 |
| A2A259 | Polycystin-2-like protein 1 OS=Mus musculus OX=10090 GN=Pkd2l1 PE=1 SV=1 |
| Q9P0L9 | Polycystin-2-like protein 1 OS=Homo sapiens OX=9606 GN=PKD2L1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF20519 | Polycystin_dom | Polycystin domain | Domain | Interproscan |
| PF08016 | PKD_channel | Polycystin cation channel | Family | Interproscan |
| PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| PF02010 | REJ | REJ domain | Family | Interproscan |
| PF01477 | PLAT | PLAT/LH2 domain | Domain | Interproscan |
| PF00024 | PAN_1 | PAN domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR046791 | Domain | Polycystin domain | Interproscan |
| IPR016187 | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR013122 | Domain | Polycystin cation channel, PKD1/PKD2 | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR035986 | Homologous_superfamily | PKD domain superfamily | Interproscan |
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR001024 | Domain | PLAT/LH2 domain | Interproscan |
| IPR003609 | Domain | PAN/Apple domain | Interproscan |
| IPR001304 | Domain | C-type lectin-like | Interproscan |
| IPR002859 | Domain | PKD/REJ-like domain | Interproscan |
| IPR051223 | Family | Polycystin | Interproscan |
| IPR036392 | Homologous_superfamily | PLAT/LH2 domain superfamily | Interproscan |
| IPR016186 | Homologous_superfamily | C-type lectin-like/link domain superfamily | Interproscan |
| IPR000203 | Conserved_site | GPS motif | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10877 | POLYCYSTIN FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005262 | Molecular Function | calcium channel activity | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0050982 | Biological Process | detection of mechanical stimulus | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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