Detailed information of XP_066928929.1 in Clytia hemisphaerica

Genomic Location: NW_027104248.1:901536...910129
NR annotation: ALJ33550.1, PaxB, partial [Clytia hemisphaerica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q90268Paired box protein Pax-2a OS=Danio rerio OX=7955 GN=pax2a PE=2 SV=2
Q06710Paired box protein Pax-8 OS=Homo sapiens OX=9606 GN=PAX8 PE=1 SV=2
Q02548Paired box protein Pax-5 OS=Homo sapiens OX=9606 GN=PAX5 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox
Transcription Factors FamilyPAX

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00292PAX'Paired box' domainDomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR001523DomainPaired domainInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR043565FamilyPAX familyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR043182DomainPaired DNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45636PAIRED BOX PROTEIN PAX-6-RELATED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan

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