Gene detail

Detailed information of XP_066929004.1 in Clytia hemisphaerica

Genomic Location: NW_027104253.1:81025...83668
NR annotation: XP_019628674.1, PREDICTED: uncharacterized protein K02A2.6-like [Branchiostoma belcheri]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_066929004.1

ATGTGGAAAAAGGAAAACCGGGAATTGGTGACTATGTGGGAAAGCTTGGTATTGGATAATGATCTACTGAAACGGTCAACAAATAATGGACTGGTGGTGGTTGTACCAAAAGTTTTGCGAACAGAATTGATGAAAACAATACATGAAGGATCAGGTCACCTTGGTGCAACAAAATGTTACGACTTAGCGAAAACAAGGATCTATTGGCCAGGTATGAAAGCTGATATCACTGAATATGTCACACAGCTGTGTAAATGTATCAAGAACAAATCTCCCAACCGTAAACAGATAGCACCCTTGATCCCAATAAGGTCATCCAAACCATTTGAAATCATTGGGATTGATTATCTCAAGTTGGATAAATGCAAAGGTAATTTTGAATATCTGTTGGTAGTAACTGATCACTTCTCCCGCTTCAGTCAAACATTCGCAACTAAGAACAAGACAGGAAAATCTGCTGCGGAAAGAATATTCAATGAATTTGTCATCAATTATGGATTCCCAGATAGAATCCACCATGATCAAGGAAAGGAGTTTAACAACAAGATGTGGGACCAACTTCATCATCTCTCAGGCATAAAGAAGTCGAATACTACACCATACCATCCAATGGGGAATGGCCAAACAGAAAGGTTTAACAGAACAATCATCAACCTGTTGAAAGCCTTGGAACCAGCTCAAAAGAAGGATTGGAAAAATTATGTCCGCAAATTGTGCTATGCATACAATTGCACAGTAAATCGATCAACTGGTTACAGCCCGCATTTCCTTATGTTTGGACGGGATCCAAAAATTCCAGTGGATATTGTCCTTGACAATAAAGTTGAAAACAAAGGACCTCAATCAGAATTTGTTCGACAATGGAAAGAGACATTTGGTAATGCCATCAAAGACGCTCAAAAACATCATGAGGCTGAAAAAGGAAAAGCAAAATATCAATACGACAAAACTTCATTTGGTGAAGAATTGGAAGAAGGAGATCATGTACTTATCAGAAACCTGTCAGAGAGAGGTGGAACAGGCAAATTGAGATCATTCTATGAAGATGATACGTATGTGGTGGTAAGCAAGACAGAAAACCTTCCTGTGTATATGTTAAAACAACTAGAGGGAACAAAAATCAAGAAACTACACCGAAATCACATAAAGAAAATCAAGAAATCATTGTCAAATCAAAGAGAAACCGTCCCTCCCCAAGTGAAGACTAATGTGATGCCATCAGCTGTAACCGAGGAAGACGAATTCGAACAGGTGGAAAATATAGAAATTTTCTTCAATTTTTTGAGGGGGAGAGAGGCAAGGAAAACATTACCTACTTTGACCCCTGTTGTCATTGTACCCACTATGACAGCTCAAGAATCTGTGAGGGAGATGAGCAAGTTATCTAGCGCAGATCTTGATTTTTTTGAAACACCACTCATACAGCATGGACCTACACCTGATGATTCGAGCAGGCCTGTTTGTACCTTCAACAATTCGGCGGTACCTTCTCATCCCGTTGGTGATTCGAGCCCGGAGGCTCACCGAGTACTAGACTCGAGCGGGTACTGCCACACAACCAACGGTGGGCTGAGTGATGATTCGAGCAGGCCTGTTTGTACCTTCGACGATTCGGCGGTACCTTCTCACCCCGTTGGTGATTCGAGCCCGGAGGCTCACCGAGTACTAGACTCGAGCGGGTACTGCCACACAACCAACGGTGGGCTGAGTGATGATTCGAGCAGGCCTGTTTGTACTTTAGACGATTCGGCGGTACCTCCTCATCCCGTTGGTGATTCGAGCCCGGAGGCTCACCGAGAACTAGACTCGAGCAGGTACTTCCGTACAATTAACGGTGGGCTGATGGATGATTCGAGCAGGCCTGCTTGTACTTTAGAAGATTCGAAGGTACCTCCTCATTCCGTTGGAGATTTGAGTGAGAGGGCTCACAGTGAGGACTCGAGCGGGTACTTTCACCCTGATAACGATGGTTTGCAAGAACAGTTTGATGTTGATGATGACGATGAGGATGTGCTTCTAGAAGAATCGGGTCATCATGGTGTCTCCCCTATCACGTCAGATCAATCATTGAATAATACTGAAGATGAAGTCTCAGACAGCTCCGAGGACGAAGTTGAGGATTCCACATCAAGCAACCAACTCGCATACGATGAATGTCTTCAACTTTATCAATTTGGTCGTCCAAAACGCATTAGAAAACCAAAGAAGTCAACTGCTATCACCGATTGCACTGCAATGATGGATGGATCAATTGAGTTGGATGTTGGTGGATCACTCGGTTGGGATGTTGGTGGATCACTCGGTTGGGATGTTGGTTCAAACGTGTTGCTGTACAATGGACAAGCCGAATACTAA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00665	rve	Integrase core domain	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47266	ENDONUCLEASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan