Gene detail

Detailed information of XP_066929129.1 in Clytia hemisphaerica

Genomic Location: NW_027104271.1:36079...40319
NR annotation: XP_047127463.1, cytotoxic granule associated RNA binding protein TIA1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q95QV8	Cytotoxic granule-associated RNA binding protein tiar-1 OS=Caenorhabditis elegans OX=6239 GN=tiar-1 PE=1 SV=1
P32588	Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PUB1 PE=1 SV=4
P42731	Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR050374	Family	RRT5/SRSF/Splicing Factor SR	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23003	RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan