Detailed information of XP_066930728.1 in Clytia hemisphaerica

Genomic Location: NW_027104356.1:1082283...1093460
NR annotation: AAG25994.1, integrin beta chain [Podocoryna carnea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P07228Integrin beta-1 OS=Gallus gallus OX=9031 GN=ITGB1 PE=1 SV=1
P53712Integrin beta-1 OS=Bos taurus OX=9913 GN=ITGB1 PE=1 SV=3
P09055Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07974EGF_2EGF-like domainDomainInterproscan
PF08725Integrin_b_cytIntegrin beta cytoplasmic domainDomainInterproscan
PF07965Integrin_B_tailIntegrin beta tail domainDomainInterproscan
PF00362Integrin_betaIntegrin beta chain VWA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013111DomainEGF-like domain, extracellularInterproscan
IPR015812FamilyIntegrin beta subunitInterproscan
IPR012896DomainIntegrin beta subunit, tailInterproscan
IPR014836DomainIntegrin beta subunit, cytoplasmic domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002369DomainIntegrin beta subunit, VWA domainInterproscan
IPR036349Homologous_superfamilyIntegrin beta tail domain superfamilyInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10082INTEGRIN BETA SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan

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