Gene detail

Detailed information of XP_066932377.1 in Clytia hemisphaerica

Genomic Location: NW_027104406.1:392785...402275
NR annotation: XP_047136436.1, polycomb complex protein BMI-1 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q7T3E6	Polycomb complex protein BMI-1-B OS=Danio rerio OX=7955 GN=bmi1b PE=2 SV=1
Q8JIR0	Polycomb complex protein BMI-1-A OS=Danio rerio OX=7955 GN=bmi1a PE=1 SV=2
P25916	Polycomb complex protein BMI-1 OS=Mus musculus OX=10090 GN=Bmi1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD\|RAWUL

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16207	RAWUL	RAWUL domain RING finger- and WD40-associated ubiquitin-like	Domain	Interproscan
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032443	Domain	RAWUL domain	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10825	RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0035102	Cellular Component	PRC1 complex	Interproscan
GO:1990841	Molecular Function	promoter-specific chromatin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11460	PCGF2, RNF110; polycomb group RING finger protein 2	-	Chromosome and associated proteins	ko03036	deepkoala