Detailed information of XP_066934199.1 in Clytia hemisphaerica

Genomic Location: NW_027103359.1:121689...125220
NR annotation: XP_012556062.2, chromobox protein homolog 1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q13185Chromobox protein homolog 3 OS=Homo sapiens OX=9606 GN=CBX3 PE=1 SV=4
Q5R6X7Chromobox protein homolog 3 OS=Pongo abelii OX=9601 GN=CBX3 PE=2 SV=1
P23198Chromobox protein homolog 3 OS=Mus musculus OX=10090 GN=Cbx3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01393Chromo_shadowChromo shadow domainDomainInterproscan
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008251DomainChromo shadow domainInterproscan
IPR017984DomainChromo domain subgroupInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR023780DomainChromo domainInterproscan
IPR051219FamilyHeterochromatin-associated chromo domain-containing proteinInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR023779Conserved_siteChromo domain, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22812CHROMOBOX PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005721Cellular Componentpericentric heterochromatinInterproscan
GO:0006325Biological Processchromatin organizationInterproscan
GO:0035064Molecular Functionmethylated histone bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11585CBX1, HP1B, SWI6; chromobox protein 1-Chromosome and associated proteinsko03036deepkoala

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