Detailed information of XP_066934820.1 in Clytia hemisphaerica

Genomic Location: NW_027104534.1:97720...167963
NR annotation: XP_047124612.1, E3 ubiquitin-protein ligase parkin-like isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7KTX7E3 ubiquitin-protein ligase parkin OS=Drosophila melanogaster OX=7227 GN=park PE=1 SV=1
E0VIU9E3 ubiquitin-protein ligase parkin OS=Pediculus humanus subsp. corporis OX=121224 GN=park PE=1 SV=1
O60260E3 ubiquitin-protein ligase parkin OS=Homo sapiens OX=9606 GN=PRKN PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM
Ubiquitin FamilyE3|E3 activity|RBR

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17976zf-RING_12RING/Ubox like zinc-binding domainDomainInterproscan
PF17978zf-RING_14RING/Ubox like zinc-binding domainDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041565DomainParkin, RING/Ubox like zinc-binding domainInterproscan
IPR041170DomainRING/Ubox-like zinc-binding domainInterproscan
IPR003977FamilyE3 ubiquitin-protein ligase parkinInterproscan
IPR047535DomainE3 ubiquitin-protein ligase parkin, RING finger, HC subclassInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
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 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04556PARK2; parkinEC:2.3.2.31
Mitochondrial biogenesisko03029deepkoala

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