Detailed information of XP_066935332.1 in Clytia hemisphaerica

Genomic Location: NW_027104551.1:411009...463615
NR annotation: XP_047141637.1, protein HIRA [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q61666Protein HIRA OS=Mus musculus OX=10090 GN=Hira PE=1 SV=3
P79987Protein HIRA OS=Gallus gallus OX=9031 GN=HIRA PE=1 SV=2
Q8QFR2Protein HIRA OS=Xenopus laevis OX=8355 GN=hira PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07569HiraTUP1-like enhancer of splitFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR011494DomainProtein HIRA-like, C-terminalInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR031120FamilyWD repeat HIR1-likeInterproscan
IPR034229DomaineIF4H, RNA recognition motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13831MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000417Cellular ComponentHIR complexInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006325Biological Processchromatin organizationInterproscan
GO:0006336Biological Processchromatin organizationInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11293HIRA, HIR1; protein HIRA/HIR1-Chromosome and associated proteinsko03036deepkoala

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